Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 DNAJC8P1-201ENST00000554535 372 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 MED28P6-201ENST00000558776 231 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 MIR3912-201ENST00000577566 105 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.99□□□□□ -2.09
CPSF4O95639 DUXAP4-201ENST00000603046 613 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC009220.3-201ENST00000604318 586 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AL022099.1-201ENST00000604551 712 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC112220.2-201ENST00000605513 533 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC069545.1-201ENST00000605671 358 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC106028.5-201ENST00000610332 395 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC011890.2-201ENST00000613393 294 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC034102.8-201ENST00000615146 484 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AL450472.3-201ENST00000615578 367 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AL158163.2-201ENST00000619110 700 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 MIR6873-201ENST00000622788 63 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC104985.3-201ENST00000623479 597 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AP003122.6-201ENST00000623831 495 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AP002371.2-201ENST00000624450 503 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.99□□□□□ -2.09
CPSF4O95639 CU459211.1-201ENST00000635667 749 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 MTND5P6-201ENST00000422338 1798 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.99□□□□□ -2.09
CPSF4O95639 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.99□□□□□ -2.09
CPSF4O95639 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CPSF4O95639 RNA5SP393-201ENST00000363423 117 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CPSF4O95639 Y_RNA.408-201ENST00000383987 102 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 RNU4-53P-201ENST00000410828 140 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.98□□□□□ -2.09
CPSF4O95639 RPS15AP38-201ENST00000413110 372 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CPSF4O95639 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.98□□□□□ -2.09
CPSF4O95639 AL449283.1-202ENST00000418249 604 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 EZH2P1-201ENST00000431167 291 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 MTCYBP34-201ENST00000439552 670 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 DPPA3P1-201ENST00000448050 469 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.98□□□□□ -2.09
CPSF4O95639 AL031183.1-201ENST00000457667 207 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AC026410.2-201ENST00000460281 156 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AL049829.1-201ENST00000465411 156 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CPSF4O95639 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.98□□□□□ -2.09
CPSF4O95639 TMEM251P1-201ENST00000503717 318 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 DSTNP2-201ENST00000504533 515 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 COX7A2P2-201ENST00000505291 250 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AC112206.4-201ENST00000515142 405 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 RNU6-1225P-201ENST00000516336 65 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.98□□□□□ -2.09
CPSF4O95639 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.98□□□□□ -2.09
CPSF4O95639 AC118942.1-201ENST00000529674 1035 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AC074050.1-201ENST00000563247 211 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 OR4K7P-201ENST00000580232 945 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.98□□□□□ -2.09
CPSF4O95639 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.98□□□□□ -2.09
CPSF4O95639 AL022067.1-201ENST00000602426 454 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AC023158.2-201ENST00000614876 543 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AC084824.4-201ENST00000620106 731 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AC004009.2-201ENST00000623016 728 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 AC010872.1-201ENST00000624225 675 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.98□□□□□ -2.09
CPSF4O95639 AC106858.1-201ENST00000637497 429 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 MIR1322-201ENST00000638013 71 ntBASIC1.98□□□□□ -2.09
CPSF4O95639 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.98□□□□□ -2.09
CPSF4O95639 AC011460.1-201ENST00000636268 1834 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 RNU6-799P-201ENST00000363567 107 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 SNORD56.5-201ENST00000364281 72 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CPSF4O95639 SNORA40.2-201ENST00000390847 128 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AL136372.1-201ENST00000403060 228 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AC007064.1-201ENST00000412238 351 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 BX682237.1-201ENST00000415016 335 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.97□□□□□ -2.09
CPSF4O95639 RPL21P32-201ENST00000419877 477 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 MRPS36P1-201ENST00000421291 307 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AC019178.2-201ENST00000423595 505 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AC007742.1-201ENST00000425789 329 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AL590233.1-201ENST00000430017 456 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 MTND2P5-201ENST00000432656 1006 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 ELOCP26-201ENST00000436067 329 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4O95639 USP9YP8-201ENST00000441913 500 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 Z96811.1-201ENST00000445880 108 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 OFD1P3Y-201ENST00000453312 783 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 SUMO2P2-201ENST00000456482 255 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 RPL31P50-201ENST00000471002 296 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AC104982.1-201ENST00000478775 574 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AC079203.1-201ENST00000487972 404 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4O95639 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4O95639 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.97□□□□□ -2.09
CPSF4O95639 LRRC6P1-201ENST00000532188 885 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.97□□□□□ -2.09
CPSF4O95639 CR383656.7-201ENST00000548164 174 ntBASIC1.97□□□□□ -2.09
CPSF4O95639 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4O95639 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4O95639 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.97□□□□□ -2.09
CPSF4O95639 MIR4637-201ENST00000582405 84 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms