Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.55□□□□□ -2
CTDNEP1O95476 AC096751.1-202ENST00000502691 1067 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.55□□□□□ -2
CTDNEP1O95476 BOLA3P3-201ENST00000505182 232 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.55□□□□□ -2
CTDNEP1O95476 AC113347.3-201ENST00000509113 148 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.55□□□□□ -2
CTDNEP1O95476 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.55□□□□□ -2
CTDNEP1O95476 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.55□□□□□ -2
CTDNEP1O95476 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC087808.1-201ENST00000520501 361 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC103783.1-201ENST00000520506 373 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 MTND2P32-201ENST00000521584 1038 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 ARL2BPP5-201ENST00000523141 481 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC087373.1-201ENST00000524920 491 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.55□□□□□ -2
CTDNEP1O95476 AL132857.1-201ENST00000555180 708 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.55□□□□□ -2
CTDNEP1O95476 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.55□□□□□ -2
CTDNEP1O95476 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.55□□□□□ -2
CTDNEP1O95476 AC020895.1-201ENST00000595362 272 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 RPP40P2-201ENST00000603596 712 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC007938.3-201ENST00000604965 623 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC069545.1-201ENST00000605671 358 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AP001521.1-201ENST00000609150 300 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC107294.1-201ENST00000609524 467 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 DUXAP10-204ENST00000612052 616 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 MIR6076-201ENST00000617521 113 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC073968.1-201ENST00000618594 637 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 MIR6852-201ENST00000621699 66 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 OR1S1-201ENST00000624470 978 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.55□□□□□ -2
CTDNEP1O95476 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CTDNEP1O95476 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CTDNEP1O95476 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.54□□□□□ -2
CTDNEP1O95476 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CTDNEP1O95476 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTDNEP1O95476 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
CTDNEP1O95476 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
CTDNEP1O95476 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CTDNEP1O95476 RNU5D-1-201ENST00000363299 116 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.54□□□□□ -2
CTDNEP1O95476 SNORA51.6-201ENST00000384151 125 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.54□□□□□ -2
CTDNEP1O95476 AC016769.3-201ENST00000396562 315 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 AC068533.2-201ENST00000411872 306 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.54□□□□□ -2
CTDNEP1O95476 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.54□□□□□ -2
CTDNEP1O95476 RNA5SP310-201ENST00000459084 116 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 AC005410.1-202ENST00000460347 485 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 AC013828.1-201ENST00000481845 158 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.54□□□□□ -2
CTDNEP1O95476 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.54□□□□□ -2
CTDNEP1O95476 AC119751.5-201ENST00000514077 770 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 RNU6-1261P-201ENST00000517194 104 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.54□□□□□ -2
CTDNEP1O95476 AC027309.2-201ENST00000520566 192 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.54□□□□□ -2
CTDNEP1O95476 SNRPGP16-201ENST00000533275 226 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.54□□□□□ -2
CTDNEP1O95476 AP001330.4-201ENST00000604350 154 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 NUTF2P8-201ENST00000604593 363 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.54□□□□□ -2
CTDNEP1O95476 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.54□□□□□ -2
CTDNEP1O95476 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.54□□□□□ -2
CTDNEP1O95476 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CTDNEP1O95476 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.54□□□□□ -2
CTDNEP1O95476 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.54□□□□□ -2
CTDNEP1O95476 AC099654.7-201ENST00000635788 2127 ntBASIC2.54□□□□□ -2
CTDNEP1O95476 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
CTDNEP1O95476 VTRNA1-1-201ENST00000363120 99 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 RNA5SP139-201ENST00000364340 117 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CTDNEP1O95476 RNU6-906P-201ENST00000384700 70 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AL024474.1-201ENST00000404655 591 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AL023807.1-201ENST00000407932 359 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 RNA5SP80-201ENST00000410475 111 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 RNU4-53P-201ENST00000410828 140 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AC099677.1-201ENST00000420575 175 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.53□□□□□ -2
CTDNEP1O95476 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.53□□□□□ -2
CTDNEP1O95476 USP9YP22-201ENST00000438971 294 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 EEF1A1P39-201ENST00000440791 250 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 RPL23AP16-201ENST00000441715 421 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.53□□□□□ -2
CTDNEP1O95476 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AIG1P1-201ENST00000503376 148 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.53□□□□□ -2
CTDNEP1O95476 AC110760.3-202ENST00000515177 371 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 RNU6-1225P-201ENST00000516336 65 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.53□□□□□ -2
CTDNEP1O95476 ZNF705CP-201ENST00000530515 889 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AC018630.1-201ENST00000541376 925 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.53□□□□□ -2
CTDNEP1O95476 MTCYBP27-201ENST00000555160 670 ntBASIC2.53□□□□□ -2
CTDNEP1O95476 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.53□□□□□ -2
CTDNEP1O95476 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms