Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTN3O95197 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.66□□□□□ -1.82
RTN3O95197 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RTN3O95197 RNU1-39P-201ENST00000383897 165 ntBASIC3.66□□□□□ -1.82
RTN3O95197 SNORA1.3-201ENST00000384676 136 ntBASIC3.66□□□□□ -1.82
RTN3O95197 MIR490-201ENST00000384865 128 ntBASIC3.66□□□□□ -1.82
RTN3O95197 MIR483-201ENST00000385070 76 ntBASIC3.66□□□□□ -1.82
RTN3O95197 SNORD17-201ENST00000390930 237 ntBASIC3.66□□□□□ -1.82
RTN3O95197 RPS4XP3-201ENST00000398541 413 ntBASIC3.66□□□□□ -1.82
RTN3O95197 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RTN3O95197 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTN3O95197 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.66□□□□□ -1.82
RTN3O95197 HMGB3P23-201ENST00000414981 585 ntBASIC3.66□□□□□ -1.82
RTN3O95197 NPM1P11-201ENST00000417106 855 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AC091390.3-201ENST00000426478 338 ntBASIC3.66□□□□□ -1.82
RTN3O95197 TIMM9P1-201ENST00000436122 256 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AC005019.1-201ENST00000436455 431 ntBASIC3.66□□□□□ -1.82
RTN3O95197 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.66□□□□□ -1.82
RTN3O95197 TRIM60P18-201ENST00000441518 828 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.66□□□□□ -1.82
RTN3O95197 COX6CP12-201ENST00000446748 202 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AC125238.1-201ENST00000448842 249 ntBASIC3.66□□□□□ -1.82
RTN3O95197 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.66□□□□□ -1.82
RTN3O95197 RPS20P20-201ENST00000460498 340 ntBASIC3.66□□□□□ -1.82
RTN3O95197 RPL30P5-201ENST00000494923 336 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.66□□□□□ -1.82
RTN3O95197 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.66□□□□□ -1.82
RTN3O95197 AC022616.6-201ENST00000520479 119 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.66□□□□□ -1.82
RTN3O95197 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.66□□□□□ -1.82
RTN3O95197 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.66□□□□□ -1.82
RTN3O95197 AC123904.2-201ENST00000548059 300 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.66□□□□□ -1.82
RTN3O95197 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.66□□□□□ -1.82
RTN3O95197 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.66□□□□□ -1.82
RTN3O95197 AC005951.2-201ENST00000576282 495 ntBASIC3.66□□□□□ -1.82
RTN3O95197 KC877982.1-201ENST00000602313 470 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AC006557.5-201ENST00000603126 811 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AC107294.3-201ENST00000609211 526 ntBASIC3.66□□□□□ -1.82
RTN3O95197 AC245517.5-201ENST00000611529 162 ntBASIC3.66□□□□□ -1.82
RTN3O95197 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RTN3O95197 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTN3O95197 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTN3O95197 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTN3O95197 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RTN3O95197 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RTN3O95197 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.65□□□□□ -1.83
RTN3O95197 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTN3O95197 RNU4-21P-201ENST00000362802 126 ntBASIC3.65□□□□□ -1.83
RTN3O95197 RNU1-33P-201ENST00000364249 162 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AP002088.1-201ENST00000382740 395 ntBASIC3.65□□□□□ -1.83
RTN3O95197 Y_RNA.608-201ENST00000410647 95 ntBASIC3.65□□□□□ -1.83
RTN3O95197 CYCSP46-201ENST00000423569 204 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.65□□□□□ -1.83
RTN3O95197 AC097713.2-201ENST00000430199 356 ntBASIC3.65□□□□□ -1.83
RTN3O95197 USP12PX-201ENST00000432383 1057 ntBASIC3.65□□□□□ -1.83
RTN3O95197 TAAR7P-201ENST00000436141 242 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AC009969.1-201ENST00000438726 172 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AC005094.1-201ENST00000440420 368 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.65□□□□□ -1.83
RTN3O95197 AC009237.8-201ENST00000445492 379 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.65□□□□□ -1.83
RTN3O95197 USP9YP12-201ENST00000450481 570 ntBASIC3.65□□□□□ -1.83
RTN3O95197 RPS27AP8-201ENST00000452665 445 ntBASIC3.65□□□□□ -1.83
RTN3O95197 SNRPFP4-201ENST00000456366 242 ntBASIC3.65□□□□□ -1.83
RTN3O95197 RPL21P10-201ENST00000463521 490 ntBASIC3.65□□□□□ -1.83
RTN3O95197 RPL7P5-201ENST00000471472 736 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AC084357.1-201ENST00000473404 255 ntBASIC3.65□□□□□ -1.83
RTN3O95197 RPL32P34-201ENST00000486380 400 ntBASIC3.65□□□□□ -1.83
RTN3O95197 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTN3O95197 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.65□□□□□ -1.83
RTN3O95197 AC074250.1-201ENST00000511117 192 ntBASIC3.65□□□□□ -1.83
RTN3O95197 FABP5P5-201ENST00000515537 406 ntBASIC3.65□□□□□ -1.83
RTN3O95197 RNU6-1256P-201ENST00000516539 103 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.65□□□□□ -1.83
RTN3O95197 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.65□□□□□ -1.83
RTN3O95197 AC100870.1-201ENST00000522035 505 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.65□□□□□ -1.83
RTN3O95197 AC004024.1-201ENST00000549244 247 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AC011611.1-201ENST00000552179 197 ntBASIC3.65□□□□□ -1.83
RTN3O95197 NCAPGP2-201ENST00000557911 754 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AL590229.1-201ENST00000603497 542 ntBASIC3.65□□□□□ -1.83
RTN3O95197 AC138749.5-201ENST00000611461 208 ntBASIC3.65□□□□□ -1.83
RTN3O95197 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.65□□□□□ -1.83
RTN3O95197 AC116165.2-201ENST00000616705 206 ntBASIC3.65□□□□□ -1.83
RTN3O95197 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTN3O95197 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTN3O95197 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.65□□□□□ -1.83
RTN3O95197 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTN3O95197 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTN3O95197 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTN3O95197 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTN3O95197 RNU6-283P-201ENST00000364788 107 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTN3O95197 SNORA9-201ENST00000384215 133 ntBASIC3.64□□□□□ -1.83
RTN3O95197 RNU6-55P-201ENST00000411092 107 ntBASIC3.64□□□□□ -1.83
RTN3O95197 RNU6-954P-201ENST00000411355 107 ntBASIC3.64□□□□□ -1.83
RTN3O95197 RNA5SP107-201ENST00000411358 122 ntBASIC3.64□□□□□ -1.83
RTN3O95197 NDUFB4P5-201ENST00000415445 361 ntBASIC3.64□□□□□ -1.83
RTN3O95197 USP9YP13-201ENST00000417797 480 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms