Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SEMA3DO95025 FRG1BP-201ENST00000278882 761 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 MIR27B-201ENST00000385129 97 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 RNA5SP354-201ENST00000391247 136 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 RNU2-52P-201ENST00000410680 190 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 MTATP6P27-201ENST00000416987 621 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 BEND7P1-201ENST00000422058 457 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.4□□□□□ -2.03
SEMA3DO95025 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AC091390.3-201ENST00000426478 338 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.4□□□□□ -2.03
SEMA3DO95025 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.4□□□□□ -2.03
SEMA3DO95025 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.4□□□□□ -2.03
SEMA3DO95025 RPL31P60-201ENST00000478450 367 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.4□□□□□ -2.03
SEMA3DO95025 AC113420.1-201ENST00000507903 571 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.4□□□□□ -2.03
SEMA3DO95025 AC093677.1-201ENST00000514414 678 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 RNU6-276P-201ENST00000516114 96 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.4□□□□□ -2.03
SEMA3DO95025 CKS1BP7-201ENST00000522230 235 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 SLC2A13P1-201ENST00000531560 322 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.4□□□□□ -2.03
SEMA3DO95025 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.4□□□□□ -2.03
SEMA3DO95025 HIGD1AP17-201ENST00000554576 276 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.4□□□□□ -2.03
SEMA3DO95025 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.4□□□□□ -2.03
SEMA3DO95025 MIR4319-201ENST00000577285 85 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 VN1R78P-201ENST00000597393 564 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 DUXAP11-201ENST00000603858 526 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AC004853.1-201ENST00000604902 698 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AC069304.2-201ENST00000605154 435 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AC097504.2-201ENST00000608088 454 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AC024257.5-201ENST00000612739 531 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AC243773.3-201ENST00000613270 256 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AP000720.1-201ENST00000625091 483 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.4□□□□□ -2.03
SEMA3DO95025 AC106858.1-201ENST00000637497 429 ntBASIC2.4□□□□□ -2.03
SEMA3DO95025 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SEMA3DO95025 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.4□□□□□ -2.03
SEMA3DO95025 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
SEMA3DO95025 RNU1-105P-201ENST00000363470 161 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 RNU4-51P-201ENST00000364206 140 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 AL162578.1-201ENST00000406202 378 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 RNU2-43P-201ENST00000410306 190 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 RNA5SP184-201ENST00000411071 108 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 NUP35P1-201ENST00000422734 947 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 THAP5P1-201ENST00000439089 262 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.39□□□□□ -2.03
SEMA3DO95025 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.39□□□□□ -2.03
SEMA3DO95025 MTCO3P11-201ENST00000455103 774 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 AC133134.1-201ENST00000466800 359 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.39□□□□□ -2.03
SEMA3DO95025 AC096576.1-201ENST00000489014 359 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 AC109464.2-201ENST00000510242 943 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 IGLV3-17-201ENST00000519099 244 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.39□□□□□ -2.03
SEMA3DO95025 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.39□□□□□ -2.03
SEMA3DO95025 AC022861.1-201ENST00000522981 663 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.39□□□□□ -2.03
SEMA3DO95025 PRELID2P1-201ENST00000552837 301 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.39□□□□□ -2.03
SEMA3DO95025 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.39□□□□□ -2.03
SEMA3DO95025 AC090616.3-201ENST00000582184 217 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 VN1R83P-201ENST00000595685 445 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 AP002826.1-201ENST00000608835 315 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 TUG1_1.1-201ENST00000610654 145 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SEMA3DO95025 U4.3-201ENST00000621047 82 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 AC097714.1-201ENST00000511272 1647 ntBASIC2.39□□□□□ -2.03
SEMA3DO95025 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SEMA3DO95025 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
SEMA3DO95025 AC010680.1-201ENST00000590024 3590 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AL139276.1-201ENST00000311910 1001 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 Y_RNA.472-201ENST00000384322 102 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 Y_RNA.548-201ENST00000384656 105 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AL592310.1-201ENST00000414330 671 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.38□□□□□ -2.03
SEMA3DO95025 MTCO2P17-201ENST00000424336 677 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.38□□□□□ -2.03
SEMA3DO95025 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.38□□□□□ -2.03
SEMA3DO95025 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.38□□□□□ -2.03
SEMA3DO95025 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SEMA3DO95025 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.38□□□□□ -2.03
SEMA3DO95025 AC092573.2-201ENST00000434546 243 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 MTND2P20-201ENST00000440805 661 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.38□□□□□ -2.03
SEMA3DO95025 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.38□□□□□ -2.03
SEMA3DO95025 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.38□□□□□ -2.03
SEMA3DO95025 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.38□□□□□ -2.03
SEMA3DO95025 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.38□□□□□ -2.03
SEMA3DO95025 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.38□□□□□ -2.03
SEMA3DO95025 AC017037.2-201ENST00000513850 890 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AC112206.4-201ENST00000515142 405 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 RNU6-583P-201ENST00000516012 92 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AC091163.3-201ENST00000518269 1144 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.38□□□□□ -2.03
SEMA3DO95025 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.38□□□□□ -2.03
SEMA3DO95025 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 218.4 ms