Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL357080.1-201ENST00000617394 239 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK1BO75841 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
UPK1BO75841 AP003476.1-201ENST00000623984 516 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK1BO75841 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.14□□□□□ -2.07
UPK1BO75841 AL161912.2-201ENST00000565707 3007 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 FTLP6-201ENST00000355274 422 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 SNORA23-201ENST00000365128 182 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 RNU6-637P-201ENST00000384050 107 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 RNU6-217P-201ENST00000384164 104 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 AL138827.1-201ENST00000402666 306 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 AL449283.1-202ENST00000418249 604 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.13□□□□□ -2.07
UPK1BO75841 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK1BO75841 AL050321.1-201ENST00000432363 400 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 AL035246.1-201ENST00000433554 1255 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.13□□□□□ -2.07
UPK1BO75841 AL671855.1-201ENST00000446875 1203 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 RPL12P25-201ENST00000455592 494 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 ATG12P2-201ENST00000456830 416 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 snoU13.22-201ENST00000459428 104 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 RPS20P20-201ENST00000460498 340 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 GZMAP1-201ENST00000503054 631 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK1BO75841 AC008837.2-201ENST00000513076 418 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 SNORA19.3-201ENST00000516165 130 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 RN7SKP57-201ENST00000517248 293 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 PSMA2P1-201ENST00000526365 646 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 COX6CP5-201ENST00000527162 228 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
UPK1BO75841 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK1BO75841 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK1BO75841 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 CCNG2P1-201ENST00000549521 1000 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.13□□□□□ -2.07
UPK1BO75841 MIR3160-1-201ENST00000577972 85 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 MIR3117-201ENST00000584034 78 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 RNU6-1192P-201ENST00000612197 107 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 RNU6-489P-201ENST00000618289 107 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 AC123767.1-202ENST00000620407 817 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.13□□□□□ -2.07
UPK1BO75841 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.13□□□□□ -2.07
UPK1BO75841 MIR7515-201ENST00000637837 67 ntBASIC2.13□□□□□ -2.07
UPK1BO75841 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
UPK1BO75841 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.13□□□□□ -2.07
UPK1BO75841 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
UPK1BO75841 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
UPK1BO75841 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
UPK1BO75841 SNORA68.1-201ENST00000364537 132 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.12□□□□□ -2.07
UPK1BO75841 RNU6-741P-201ENST00000383889 107 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 RNU6-114P-201ENST00000384704 105 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AL513475.1-201ENST00000406602 315 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 RNU6ATAC-201ENST00000408749 126 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 RNA5SP80-201ENST00000410475 111 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 RNA5SP21-201ENST00000410917 96 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 RAB9AP3-201ENST00000412737 573 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.12□□□□□ -2.07
UPK1BO75841 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.12□□□□□ -2.07
UPK1BO75841 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.12□□□□□ -2.07
UPK1BO75841 AC007389.2-201ENST00000434630 306 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AP000949.1-201ENST00000438328 629 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.12□□□□□ -2.07
UPK1BO75841 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.12□□□□□ -2.07
UPK1BO75841 MTND5P14-201ENST00000441481 1267 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 MTND1P31-201ENST00000449206 961 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 RAB9AP1-201ENST00000449393 573 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 MRPS17P3-201ENST00000465453 385 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AC103987.1-201ENST00000473394 348 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 FAM172BP-201ENST00000487497 1089 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 HMGB1P36-201ENST00000487709 576 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AC113155.1-201ENST00000511141 769 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 NRON-201ENST00000517270 370 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 SUB1P1-201ENST00000524415 382 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 ATP5F1P5-201ENST00000526403 760 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AP003497.1-201ENST00000528472 562 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.12□□□□□ -2.07
UPK1BO75841 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
UPK1BO75841 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.12□□□□□ -2.07
UPK1BO75841 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
UPK1BO75841 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.12□□□□□ -2.07
UPK1BO75841 MIR5680-201ENST00000577577 84 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AC061975.8-201ENST00000587058 721 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AC026422.1-201ENST00000623961 452 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.12□□□□□ -2.07
UPK1BO75841 Z82209.1-201ENST00000422141 2135 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
UPK1BO75841 CCT4P2-201ENST00000233836 1548 ntBASIC2.12□□□□□ -2.07
UPK1BO75841 AL079343.1-201ENST00000572358 1771 ntBASIC2.11□□□□□ -2.07
UPK1BO75841 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
UPK1BO75841 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
UPK1BO75841 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.11□□□□□ -2.07
UPK1BO75841 RNU6-140P-201ENST00000384566 108 ntBASIC2.11□□□□□ -2.07
UPK1BO75841 RNU6-1072P-201ENST00000384703 107 ntBASIC2.11□□□□□ -2.07
UPK1BO75841 RNU6-443P-201ENST00000384780 107 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms