Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.33□□□□□ -2.04
SHOX2O60902 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.33□□□□□ -2.04
SHOX2O60902 AC025281.1-201ENST00000567026 265 ntBASIC2.33□□□□□ -2.04
SHOX2O60902 MIR4666A-201ENST00000580160 79 ntBASIC2.33□□□□□ -2.04
SHOX2O60902 AC105224.1-201ENST00000587055 421 ntBASIC2.33□□□□□ -2.04
SHOX2O60902 AL035413.2-201ENST00000604801 525 ntBASIC2.33□□□□□ -2.04
SHOX2O60902 AL121917.1-203ENST00000605534 577 ntBASIC2.33□□□□□ -2.04
SHOX2O60902 AC007619.2-201ENST00000605743 379 ntBASIC2.33□□□□□ -2.04
SHOX2O60902 AC025754.2-201ENST00000606491 432 ntBASIC2.33□□□□□ -2.04
SHOX2O60902 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SHOX2O60902 AC011330.2-201ENST00000621680 635 ntBASIC2.33□□□□□ -2.04
SHOX2O60902 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.33□□□□□ -2.04
SHOX2O60902 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SHOX2O60902 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SHOX2O60902 AC062016.1-201ENST00000355719 319 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 RNA5SP354-201ENST00000391247 136 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AL590084.1-201ENST00000407885 387 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 RNU2-28P-201ENST00000410457 189 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 RNU2-52P-201ENST00000410680 190 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.32□□□□□ -2.04
SHOX2O60902 TAF13P2-201ENST00000416876 286 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 Z75741.2-201ENST00000417272 1167 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AC009414.1-201ENST00000427200 443 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AC092573.2-201ENST00000434546 243 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 ARPC3P1-201ENST00000437218 533 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 SDR42E1P3-201ENST00000438345 502 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AC105272.1-201ENST00000438604 198 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOX2O60902 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.32□□□□□ -2.04
SHOX2O60902 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOX2O60902 RPL23AP7-203ENST00000449021 469 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOX2O60902 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOX2O60902 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOX2O60902 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOX2O60902 RNU6-420P-201ENST00000458780 107 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 RPL23AP45-201ENST00000476406 468 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 RPL31P60-201ENST00000478450 367 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOX2O60902 NAMPTP2-201ENST00000505629 1115 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 OR5BM1P-201ENST00000512021 366 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOX2O60902 AC034159.1-201ENST00000513885 583 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 COX6CP8-201ENST00000522620 226 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.32□□□□□ -2.04
SHOX2O60902 AMZ2P1-203ENST00000565833 850 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 RPL23AP84-201ENST00000571193 464 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 MIR4319-201ENST00000577285 85 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.32□□□□□ -2.04
SHOX2O60902 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.32□□□□□ -2.04
SHOX2O60902 AL136363.1-201ENST00000605349 337 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AC245517.5-201ENST00000611529 162 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 AL118508.4-201ENST00000624142 1176 ntBASIC2.32□□□□□ -2.04
SHOX2O60902 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.32□□□□□ -2.04
SHOX2O60902 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHOX2O60902 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHOX2O60902 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHOX2O60902 Y_RNA.338-201ENST00000365320 114 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHOX2O60902 AL360182.1-201ENST00000397433 468 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 RN7SKP192-201ENST00000411291 327 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 MTCO3P1-205ENST00000422088 832 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.31□□□□□ -2.04
SHOX2O60902 PSMA6P3-201ENST00000428242 164 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AL590383.1-201ENST00000428602 75 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.31□□□□□ -2.04
SHOX2O60902 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.31□□□□□ -2.04
SHOX2O60902 AL512637.2-201ENST00000431287 1256 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AL591806.2-201ENST00000433122 173 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 HMGB3P12-201ENST00000438745 556 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC000041.1-201ENST00000439655 175 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AL353718.1-201ENST00000451028 517 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.31□□□□□ -2.04
SHOX2O60902 AC013828.1-201ENST00000481845 158 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.31□□□□□ -2.04
SHOX2O60902 COX7A2P2-201ENST00000505291 250 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.31□□□□□ -2.04
SHOX2O60902 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.31□□□□□ -2.04
SHOX2O60902 AC008716.1-201ENST00000511084 513 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHOX2O60902 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.31□□□□□ -2.04
SHOX2O60902 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.31□□□□□ -2.04
SHOX2O60902 RNA5SP24-201ENST00000516478 95 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.31□□□□□ -2.04
SHOX2O60902 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHOX2O60902 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.31□□□□□ -2.04
SHOX2O60902 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.31□□□□□ -2.04
SHOX2O60902 AL512310.1-201ENST00000548639 172 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC009097.3-201ENST00000563557 1018 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 SNORD53-201ENST00000579969 78 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC002984.1-201ENST00000591692 448 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 BNIP3P24-201ENST00000593398 557 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AP003973.1-201ENST00000604639 691 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 VN1R74P-201ENST00000613259 503 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC003001.2-201ENST00000616294 831 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC097460.3-201ENST00000623099 442 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AC064859.1-201ENST00000624741 174 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms