Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC025034.2-201ENST00000623264 286 ntBASIC3.99□□□□□ -1.77
PHGDHO43175 MIR3653-201ENST00000625572 110 ntBASIC3.99□□□□□ -1.77
PHGDHO43175 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.99□□□□□ -1.77
PHGDHO43175 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.99□□□□□ -1.77
PHGDHO43175 AL137003.2-201ENST00000606924 2538 ntBASIC3.99□□□□□ -1.77
PHGDHO43175 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PHGDHO43175 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PHGDHO43175 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PHGDHO43175 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PHGDHO43175 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PHGDHO43175 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PHGDHO43175 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.98□□□□□ -1.77
PHGDHO43175 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PHGDHO43175 RNU6-534P-201ENST00000364877 106 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 RNU6-996P-201ENST00000365438 107 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 HSPE1P12-201ENST00000412576 301 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.98□□□□□ -1.77
PHGDHO43175 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.98□□□□□ -1.77
PHGDHO43175 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.98□□□□□ -1.77
PHGDHO43175 ZNF90P2-204ENST00000419323 1075 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 AL451054.2-201ENST00000420896 202 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.98□□□□□ -1.77
PHGDHO43175 AF228730.2-201ENST00000438784 848 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.98□□□□□ -1.77
PHGDHO43175 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.98□□□□□ -1.77
PHGDHO43175 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.98□□□□□ -1.77
PHGDHO43175 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.98□□□□□ -1.77
PHGDHO43175 H2AFZP6-201ENST00000444403 394 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.98□□□□□ -1.77
PHGDHO43175 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.98□□□□□ -1.77
PHGDHO43175 FABP5P13-201ENST00000452144 328 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 RPL31P58-201ENST00000469001 379 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 VN1R17P-201ENST00000472048 1090 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 AC091167.1-201ENST00000492017 396 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.98□□□□□ -1.77
PHGDHO43175 AC108078.2-201ENST00000510750 236 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.98□□□□□ -1.77
PHGDHO43175 RNA5SP503-201ENST00000517047 117 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 NRON-201ENST00000517270 370 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 AC009643.1-201ENST00000532030 391 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 AP001029.3-201ENST00000588063 596 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.98□□□□□ -1.77
PHGDHO43175 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.98□□□□□ -1.77
PHGDHO43175 AL591424.2-201ENST00000617023 128 ntBASIC3.98□□□□□ -1.77
PHGDHO43175 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.98□□□□□ -1.77
PHGDHO43175 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PHGDHO43175 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.98□□□□□ -1.77
PHGDHO43175 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PHGDHO43175 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.98□□□□□ -1.77
PHGDHO43175 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PHGDHO43175 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PHGDHO43175 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PHGDHO43175 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.98□□□□□ -1.77
PHGDHO43175 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PHGDHO43175 CKAP2P1-201ENST00000555477 2049 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 AC004520.1-201ENST00000608362 1413 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AC006020.1-201ENST00000420179 1854 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PHGDHO43175 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PHGDHO43175 AC007685.1-201ENST00000329806 452 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 Y_RNA.38-201ENST00000362617 102 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 RNU1-32P-201ENST00000363937 159 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 RNU6-61P-201ENST00000365528 109 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PHGDHO43175 AL078595.1-201ENST00000404458 226 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 MIR1251-201ENST00000408552 70 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 MIR1290-201ENST00000408735 78 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 RN7SKP285-201ENST00000410137 318 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 RNA5SP129-201ENST00000410276 118 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AL513331.1-201ENST00000411908 397 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.97□□□□□ -1.77
PHGDHO43175 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.97□□□□□ -1.77
PHGDHO43175 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.97□□□□□ -1.77
PHGDHO43175 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.97□□□□□ -1.77
PHGDHO43175 SEPT14P3-201ENST00000439401 183 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 MTATP6P23-201ENST00000440153 476 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 AL732372.2-207ENST00000445840 183 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.97□□□□□ -1.77
PHGDHO43175 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.97□□□□□ -1.77
PHGDHO43175 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
PHGDHO43175 SEPT14P2-201ENST00000453405 183 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 UQCRHP4-201ENST00000471686 272 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.97□□□□□ -1.77
PHGDHO43175 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PHGDHO43175 AC026726.1-201ENST00000512859 601 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 SEPT14P4-201ENST00000513445 186 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AC105417.1-201ENST00000514691 285 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 SNORA70.16-201ENST00000516390 95 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 RNU6-352P-201ENST00000516908 107 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 RNU6-835P-201ENST00000516974 104 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.97□□□□□ -1.77
PHGDHO43175 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.97□□□□□ -1.77
PHGDHO43175 FO082796.1-201ENST00000523795 183 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 OR5B19P-201ENST00000531766 928 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.97□□□□□ -1.77
PHGDHO43175 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms