Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.44□□□□□ -1.7
FOXN1O15353 AL360157.1-201ENST00000565962 87 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC093519.1-201ENST00000566109 298 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN1O15353 MIR5186-201ENST00000577504 120 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.44□□□□□ -1.7
FOXN1O15353 AC023813.4-201ENST00000607580 580 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AL161734.1-201ENST00000609720 557 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AL162274.2-201ENST00000614406 332 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AL158196.1-201ENST00000616786 434 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC018926.3-201ENST00000618841 406 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 RMST_7.1-201ENST00000621935 268 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 RNF6P1-201ENST00000444889 1784 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN1O15353 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN1O15353 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXN1O15353 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN1O15353 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
FOXN1O15353 SNRPEP3-201ENST00000338402 276 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 SNORA5B-201ENST00000363786 132 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 RNU6-317P-201ENST00000384031 107 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AL354719.1-201ENST00000406535 843 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXN1O15353 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN1O15353 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN1O15353 AL356535.1-201ENST00000440335 398 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 BRK1P2-201ENST00000442875 223 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN1O15353 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN1O15353 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN1O15353 RNU6-1218P-201ENST00000458990 108 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AP001992.1-205ENST00000462248 379 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AC106872.3-201ENST00000495104 446 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN1O15353 AC103851.1-201ENST00000506833 274 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AC023141.12-201ENST00000512399 199 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 RNU7-30P-201ENST00000516835 62 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 RN7SKP116-201ENST00000516902 319 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AC022695.1-201ENST00000522089 237 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AP003181.2-201ENST00000528941 181 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN1O15353 AC068714.1-201ENST00000559623 800 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN1O15353 AC006077.1-201ENST00000604746 343 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 MIR98-201ENST00000606724 119 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN1O15353 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXN1O15353 AL591424.2-201ENST00000617023 128 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXN1O15353 C2orf27A-204ENST00000623058 969 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AP006248.2-201ENST00000623309 592 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXN1O15353 AC100810.6-201ENST00000638068 285 ntBASIC4.43□□□□□ -1.7
FOXN1O15353 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
FOXN1O15353 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN1O15353 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN1O15353 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN1O15353 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN1O15353 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
FOXN1O15353 OR5J1P-201ENST00000313544 939 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN1O15353 Y_RNA.144-201ENST00000363521 113 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 Y_RNA.157-201ENST00000363638 102 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN1O15353 RNU6-769P-201ENST00000384407 104 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC068050.1-201ENST00000394891 380 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AL121972.1-201ENST00000402023 252 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AL590290.1-201ENST00000405336 380 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 MIR320C1-201ENST00000408566 88 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC073264.1-201ENST00000411508 416 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXN1O15353 RPL35AP12-201ENST00000425362 338 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN1O15353 AF228730.2-201ENST00000438784 848 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 SEPT14P3-201ENST00000439401 183 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 CBX1P4-201ENST00000439415 457 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 HMGB1P37-201ENST00000439613 609 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 RPS7P5-201ENST00000441482 581 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 RANP8-201ENST00000444720 713 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 CBWD4P-201ENST00000445695 655 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AL732372.2-207ENST00000445840 183 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXN1O15353 AC002553.2-201ENST00000453217 340 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 SEPT14P2-201ENST00000453405 183 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXN1O15353 SEPT14P4-201ENST00000513445 186 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC006499.2-201ENST00000513470 337 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
FOXN1O15353 SNORA19.2-201ENST00000516013 114 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 RNU6-835P-201ENST00000516974 104 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC087369.1-201ENST00000520775 996 ntBASIC4.42□□□□□ -1.7
FOXN1O15353 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms