Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 BNIP3P2-201ENST00000441221 577 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGB3O15347 MRPS17P3-201ENST00000465453 385 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGB3O15347 AC022447.3-201ENST00000506865 495 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AC008413.1-201ENST00000511864 177 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGB3O15347 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGB3O15347 AP002748.2-201ENST00000528671 348 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AC010186.2-204ENST00000537668 439 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGB3O15347 GTF3AP2-201ENST00000557014 266 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGB3O15347 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGB3O15347 AC040174.2-201ENST00000602701 465 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AC025588.2-201ENST00000604851 466 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AL627230.6-201ENST00000611129 280 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AC091932.3-201ENST00000624223 323 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 ZNF833P-201ENST00000424938 1494 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMGB3O15347 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HMGB3O15347 SGO1P1-201ENST00000603525 1447 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMGB3O15347 ANKRD36P1-201ENST00000344424 659 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HMGB3O15347 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMGB3O15347 MIR16-1-201ENST00000385271 89 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 U3.26-201ENST00000391236 204 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.68□□□□□ -2.14
HMGB3O15347 AC107081.1-201ENST00000414975 361 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 CYCSP48-201ENST00000417124 323 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGB3O15347 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGB3O15347 HMGB1P9-201ENST00000429856 646 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMGB3O15347 TPTE2P1-204ENST00000435256 593 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC016691.1-201ENST00000441321 413 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 PIGFP3-201ENST00000441918 722 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC005002.1-201ENST00000447458 540 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGB3O15347 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.68□□□□□ -2.14
HMGB3O15347 HSPE1P6-201ENST00000479457 291 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC011825.1-201ENST00000484967 388 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 LARP1BP2-201ENST00000486594 519 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC068781.1-201ENST00000488231 618 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC084024.2-201ENST00000503480 791 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC138853.1-201ENST00000503549 823 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC118465.1-201ENST00000513820 1271 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC026801.2-201ENST00000515352 425 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 SCARNA15.2-201ENST00000516409 127 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 RNA5SP148-201ENST00000516527 94 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 SNORA31.25-201ENST00000517242 134 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 OR5AQ1P-201ENST00000527596 927 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 HSPE1P3-201ENST00000559254 309 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 OR4K8P-201ENST00000578842 1048 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 MIR4429-201ENST00000580105 73 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGB3O15347 AL109918.3-201ENST00000603072 338 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC080013.4-201ENST00000607624 649 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AL163051.2-201ENST00000618976 735 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 uc_338.20-201ENST00000621563 178 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGB3O15347 AC009487.4-201ENST00000624969 3585 ntBASIC1.68□□□□□ -2.14
HMGB3O15347 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGB3O15347 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGB3O15347 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGB3O15347 OR5J1P-201ENST00000313544 939 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 RNU5A-1-201ENST00000362698 116 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 RNU6-217P-201ENST00000384164 104 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 AC023141.4-201ENST00000412031 328 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 HMGB1P49-201ENST00000418882 569 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 EIF4EP4-201ENST00000424916 578 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGB3O15347 AC044797.1-201ENST00000445744 679 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGB3O15347 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGB3O15347 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGB3O15347 NDUFA5P7-201ENST00000452914 242 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGB3O15347 AP1S2P1-201ENST00000457344 379 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGB3O15347 MRPS17P9-201ENST00000511924 393 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 RNU2-19P-201ENST00000517288 84 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGB3O15347 RPL7P20-201ENST00000520308 745 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGB3O15347 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGB3O15347 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGB3O15347 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.67□□□□□ -2.14
HMGB3O15347 AC245100.7-201ENST00000609678 442 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HMGB3O15347 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGB3O15347 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HMGB3O15347 ZNF355P-201ENST00000427301 3216 ntBASIC1.67□□□□□ -2.14
HMGB3O15347 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGB3O15347 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGB3O15347 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms