Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AMZ2P1-203ENST00000565833 850 ntBASIC3.56□□□□□ -1.84
CUX2O14529 AC068620.3-201ENST00000602749 560 ntBASIC3.56□□□□□ -1.84
CUX2O14529 HMGN2P28-201ENST00000606102 262 ntBASIC3.56□□□□□ -1.84
CUX2O14529 AC025048.6-202ENST00000627667 438 ntBASIC3.56□□□□□ -1.84
CUX2O14529 CU459211.1-201ENST00000635667 749 ntBASIC3.56□□□□□ -1.84
CUX2O14529 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CUX2O14529 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CUX2O14529 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CUX2O14529 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CUX2O14529 RNU6-115P-201ENST00000364310 107 ntBASIC3.55□□□□□ -1.84
CUX2O14529 RNA5SP189-201ENST00000364920 115 ntBASIC3.55□□□□□ -1.84
CUX2O14529 RNU4-78P-201ENST00000410940 126 ntBASIC3.55□□□□□ -1.84
CUX2O14529 OFD1P18Y-201ENST00000420889 959 ntBASIC3.55□□□□□ -1.84
CUX2O14529 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.55□□□□□ -1.84
CUX2O14529 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.55□□□□□ -1.84
CUX2O14529 PPP1R2P5-201ENST00000457256 603 ntBASIC3.55□□□□□ -1.84
CUX2O14529 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.55□□□□□ -1.84
CUX2O14529 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.55□□□□□ -1.84
CUX2O14529 AC091860.1-201ENST00000505723 432 ntBASIC3.55□□□□□ -1.84
CUX2O14529 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
CUX2O14529 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.55□□□□□ -1.84
CUX2O14529 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.55□□□□□ -1.84
CUX2O14529 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.55□□□□□ -1.84
CUX2O14529 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.55□□□□□ -1.84
CUX2O14529 AC008507.2-201ENST00000588402 1176 ntBASIC3.55□□□□□ -1.84
CUX2O14529 AC090330.1-201ENST00000588646 764 ntBASIC3.55□□□□□ -1.84
CUX2O14529 AP003973.1-201ENST00000604639 691 ntBASIC3.55□□□□□ -1.84
CUX2O14529 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.55□□□□□ -1.84
CUX2O14529 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.55□□□□□ -1.84
CUX2O14529 CYP3A51P-201ENST00000633513 256 ntBASIC3.55□□□□□ -1.84
CUX2O14529 MIR3199-2-201ENST00000636243 86 ntBASIC3.55□□□□□ -1.84
CUX2O14529 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.55□□□□□ -1.84
CUX2O14529 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.55□□□□□ -1.84
CUX2O14529 AL136520.1-201ENST00000600311 1322 ntBASIC3.55□□□□□ -1.84
CUX2O14529 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.55□□□□□ -1.84
CUX2O14529 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
CUX2O14529 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CUX2O14529 MTND5P7-201ENST00000413558 1798 ntBASIC3.55□□□□□ -1.84
CUX2O14529 RNU1-51P-201ENST00000365345 176 ntBASIC3.54□□□□□ -1.84
CUX2O14529 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CUX2O14529 SNORA48.3-201ENST00000391081 134 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AL627390.1-201ENST00000396055 340 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AC004965.1-201ENST00000413033 213 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.54□□□□□ -1.84
CUX2O14529 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.54□□□□□ -1.84
CUX2O14529 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.54□□□□□ -1.84
CUX2O14529 AL138799.3-201ENST00000438968 350 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AL118520.1-201ENST00000450770 291 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AC007395.1-201ENST00000451333 677 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.54□□□□□ -1.84
CUX2O14529 SYPL1P1-201ENST00000473622 768 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AC104629.1-201ENST00000494226 508 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.54□□□□□ -1.84
CUX2O14529 RNA5SP309-201ENST00000516670 106 ntBASIC3.54□□□□□ -1.84
CUX2O14529 RNU6-826P-201ENST00000516827 104 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AC113368.1-201ENST00000603736 382 ntBASIC3.54□□□□□ -1.84
CUX2O14529 DPRXP5-201ENST00000604662 539 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AC010678.1-201ENST00000614118 713 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AP003476.1-201ENST00000623984 516 ntBASIC3.54□□□□□ -1.84
CUX2O14529 ZNF734P-201ENST00000419494 1534 ntBASIC3.54□□□□□ -1.84
CUX2O14529 RNU6-619P-201ENST00000365146 108 ntBASIC3.54□□□□□ -1.84
CUX2O14529 RPL7P27-201ENST00000403775 720 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.54□□□□□ -1.84
CUX2O14529 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.54□□□□□ -1.84
CUX2O14529 HMGB1P27-201ENST00000431429 603 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.54□□□□□ -1.84
CUX2O14529 AC084024.2-201ENST00000503480 791 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.54□□□□□ -1.84
CUX2O14529 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.54□□□□□ -1.84
CUX2O14529 AC104417.1-201ENST00000523974 751 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AP003066.2-201ENST00000529375 555 ntBASIC3.54□□□□□ -1.84
CUX2O14529 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.54□□□□□ -1.84
CUX2O14529 SNORD39.3-201ENST00000584451 71 ntBASIC3.54□□□□□ -1.84
CUX2O14529 SNRPGP15-201ENST00000600149 222 ntBASIC3.54□□□□□ -1.84
CUX2O14529 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.53□□□□□ -1.84
CUX2O14529 U8.9-201ENST00000365667 134 ntBASIC3.53□□□□□ -1.84
CUX2O14529 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CUX2O14529 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CUX2O14529 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.53□□□□□ -1.84
CUX2O14529 RPS6P14-201ENST00000425165 719 ntBASIC3.53□□□□□ -1.84
CUX2O14529 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.53□□□□□ -1.84
CUX2O14529 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.53□□□□□ -1.84
CUX2O14529 RPS29P12-201ENST00000460178 152 ntBASIC3.53□□□□□ -1.84
CUX2O14529 TRAV31-201ENST00000502780 342 ntBASIC3.53□□□□□ -1.84
CUX2O14529 TBCAP3-201ENST00000512475 312 ntBASIC3.53□□□□□ -1.84
CUX2O14529 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.53□□□□□ -1.84
CUX2O14529 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.53□□□□□ -1.84
CUX2O14529 AC093519.1-201ENST00000566109 298 ntBASIC3.53□□□□□ -1.84
CUX2O14529 AL137847.3-201ENST00000611521 109 ntBASIC3.53□□□□□ -1.84
CUX2O14529 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.53□□□□□ -1.84
CUX2O14529 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.53□□□□□ -1.84
CUX2O14529 AL512506.2-201ENST00000624472 458 ntBASIC3.53□□□□□ -1.84
CUX2O14529 AC048347.1-201ENST00000624621 427 ntBASIC3.53□□□□□ -1.84
CUX2O14529 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CUX2O14529 SNORA31-201ENST00000362607 130 ntBASIC3.52□□□□□ -1.85
CUX2O14529 RNU6-1066P-201ENST00000363573 105 ntBASIC3.52□□□□□ -1.85
CUX2O14529 Y_RNA.354-201ENST00000365448 111 ntBASIC3.52□□□□□ -1.85
CUX2O14529 RNU6-342P-201ENST00000384521 104 ntBASIC3.52□□□□□ -1.85
CUX2O14529 AL138880.1-201ENST00000405824 642 ntBASIC3.52□□□□□ -1.85
CUX2O14529 AC092634.2-201ENST00000428146 1010 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms