Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 FAM35DP-201ENST00000323387 2712 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM38O00635 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
TRIM38O00635 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM38O00635 SNORA71.3-201ENST00000362582 128 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 Y_RNA.394-201ENST00000383942 103 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 Y_RNA.402-201ENST00000383972 102 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 RNU6ATAC-201ENST00000408749 126 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 RPS3AP3-201ENST00000411933 242 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 RPL7AP73-201ENST00000413490 353 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 AC069157.1-201ENST00000421749 137 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 VDAC1P3-201ENST00000434069 851 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM38O00635 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 MTND6P13-201ENST00000443510 523 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 RPL17P49-201ENST00000443728 411 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 RPL7P15-201ENST00000461190 712 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 RPS3AP50-201ENST00000487064 803 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM38O00635 RNU2-58P-201ENST00000516403 183 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.04□□□□□ -1.76
TRIM38O00635 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 AP000857.1-201ENST00000532151 543 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM38O00635 AC123904.2-201ENST00000548059 300 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 AL157394.1-201ENST00000562983 1224 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 MIR5685-201ENST00000579080 79 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 MIR3690-201ENST00000580266 75 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC024220.1-201ENST00000603675 484 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AL034351.1-201ENST00000605288 668 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 AL355810.1-201ENST00000614629 552 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AL450472.3-201ENST00000615578 367 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC009233.1-201ENST00000616477 371 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM38O00635 MIR6075-201ENST00000620782 95 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 AC243312.2-201ENST00000623340 601 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM38O00635 MIR6863-201ENST00000636112 90 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TRIM38O00635 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM38O00635 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM38O00635 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM38O00635 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM38O00635 AC116667.1-201ENST00000604855 2072 ntBASIC4.04□□□□□ -1.76
TRIM38O00635 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM38O00635 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 FRG1CP-201ENST00000358464 769 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TRIM38O00635 Y_RNA.89-201ENST00000363031 102 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 RNU6-1227P-201ENST00000383981 107 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TRIM38O00635 MTCO3P40-201ENST00000392516 676 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 AL109755.1-201ENST00000401791 649 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AL590004.1-201ENST00000405321 300 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 MIR1179-201ENST00000408703 91 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 RNU2-8P-201ENST00000410727 190 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 HSPE1P12-201ENST00000412576 301 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 SPA17P1-201ENST00000416656 452 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM38O00635 SDCBPP3-201ENST00000419629 891 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM38O00635 MTATP6P4-201ENST00000427725 675 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC079780.1-201ENST00000428259 207 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC018644.1-201ENST00000429934 551 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM38O00635 GOT2P5-201ENST00000433995 546 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC093019.1-201ENST00000443135 252 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TRIM38O00635 MTND1P12-201ENST00000455231 147 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 RPL23AP31-201ENST00000456160 467 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 VN1R17P-201ENST00000472048 1090 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 RPS29P25-201ENST00000481709 171 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
TRIM38O00635 RPL31P61-201ENST00000496160 376 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM38O00635 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM38O00635 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM38O00635 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM38O00635 Y_RNA.675-201ENST00000516389 149 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AP003072.1-201ENST00000531740 145 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 SNRPGP16-201ENST00000533275 226 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.03□□□□□ -1.76
TRIM38O00635 AL133271.1-201ENST00000538229 291 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 AC125611.2-201ENST00000551907 647 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC007424.1-203ENST00000554613 687 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms