Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN3O00409 NEK4P1-201ENST00000433383 879 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 MTND3P21-201ENST00000433774 331 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 MTCO3P38-201ENST00000468910 766 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 RPS3AP14-201ENST00000483907 780 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 AC023194.1-201ENST00000493084 308 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN3O00409 AC008549.1-201ENST00000512900 643 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN3O00409 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN3O00409 SNORA31.8-201ENST00000516327 108 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 RNU2-10P-201ENST00000516375 211 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 SCARNA24.1-201ENST00000516465 137 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 RNU6-506P-201ENST00000516553 94 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 RNU7-51P-201ENST00000516560 62 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXN3O00409 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN3O00409 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXN3O00409 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXN3O00409 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXN3O00409 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXN3O00409 RPL21P12-201ENST00000559810 515 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXN3O00409 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXN3O00409 AC020914.4-201ENST00000597690 277 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 AC069234.5-201ENST00000611056 416 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 SDR42E1P2-201ENST00000614861 481 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 MIR8058-201ENST00000615737 89 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 AC010133.1-201ENST00000615809 842 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXN3O00409 AC110801.1-201ENST00000623590 212 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN3O00409 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXN3O00409 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXN3O00409 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXN3O00409 OR4G2P-202ENST00000641004 1759 ntBASIC4.07□□□□□ -1.76
FOXN3O00409 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXN3O00409 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
FOXN3O00409 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
FOXN3O00409 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 AC116096.1-201ENST00000566804 2314 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXN3O00409 FAM35DP-201ENST00000323387 2712 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXN3O00409 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
FOXN3O00409 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXN3O00409 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 RNU6-641P-201ENST00000384006 107 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 SOD2P1-201ENST00000396543 562 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 AL356967.1-201ENST00000406305 431 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 RPL21P109-201ENST00000422213 475 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 DPPA2P1-201ENST00000428060 556 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 MTCO2P11-201ENST00000431069 680 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXN3O00409 AC002486.1-201ENST00000435098 391 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 UBE2V1P8-201ENST00000437166 265 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 AC016696.1-201ENST00000446949 318 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXN3O00409 HSPE1P6-201ENST00000479457 291 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXN3O00409 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.06□□□□□ -1.76
FOXN3O00409 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXN3O00409 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXN3O00409 AC093012.1-202ENST00000549403 582 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 AC136624.4-201ENST00000573044 370 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXN3O00409 AC098848.2-201ENST00000588023 330 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 GLUD1P4-201ENST00000590914 418 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.06□□□□□ -1.76
FOXN3O00409 AC067959.1-201ENST00000604334 379 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 AL109618.2-201ENST00000605527 211 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 AP002826.1-201ENST00000608835 315 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 ZYXP1-201ENST00000617638 118 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 AL589994.2-201ENST00000621124 579 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 AC244100.1-202ENST00000621554 382 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 FP236240.3-201ENST00000623061 327 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXN3O00409 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
FOXN3O00409 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
FOXN3O00409 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 CR848007.1-201ENST00000442354 1699 ntBASIC4.06□□□□□ -1.76
FOXN3O00409 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
FOXN3O00409 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXN3O00409 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXN3O00409 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXN3O00409 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXN3O00409 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXN3O00409 AC004520.1-201ENST00000608362 1413 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXN3O00409 OR4G2P-201ENST00000328113 903 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 Y_RNA.1-201ENST00000352915 104 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
FOXN3O00409 RNU1-18P-201ENST00000363062 164 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms