Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.88□□□□□ -1.95
PDLIM1O00151 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC005832.2-201ENST00000538921 1430 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDLIM1O00151 CD24P4-201ENST00000382840 243 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 U3.19-201ENST00000390893 196 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 RSL24D1P4-201ENST00000400938 484 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.88□□□□□ -1.95
PDLIM1O00151 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC108734.1-201ENST00000439549 399 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 RN7SL633P-201ENST00000488974 297 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 AC093809.1-201ENST00000509155 340 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC112673.1-201ENST00000513168 575 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.88□□□□□ -1.95
PDLIM1O00151 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC107016.2-201ENST00000547968 190 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 MTATP6P24-201ENST00000576835 677 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC024560.3-201ENST00000608482 349 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 AC063944.3-201ENST00000609969 533 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 AC087683.2-201ENST00000611384 326 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 AC100793.4-201ENST00000613683 429 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 Z99129.2-201ENST00000619967 314 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.88□□□□□ -1.95
PDLIM1O00151 AC008993.2-201ENST00000631744 806 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
PDLIM1O00151 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.88□□□□□ -1.95
PDLIM1O00151 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PDLIM1O00151 GABRG2-229ENST00000641017 3628 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
PDLIM1O00151 DEFB108F-201ENST00000344638 222 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AL672167.1-206ENST00000356293 943 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 Y_RNA.18-201ENST00000362461 102 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 RNA5SP393-201ENST00000363423 117 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.87□□□□□ -1.95
PDLIM1O00151 RNU6-114P-201ENST00000384704 105 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 MIR592-201ENST00000384959 97 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 MIR493-201ENST00000385254 89 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.87□□□□□ -1.95
PDLIM1O00151 AC063979.1-201ENST00000415539 377 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.87□□□□□ -1.95
PDLIM1O00151 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.87□□□□□ -1.95
PDLIM1O00151 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.87□□□□□ -1.95
PDLIM1O00151 MTND1P20-201ENST00000430341 950 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.87□□□□□ -1.95
PDLIM1O00151 AC034222.1-201ENST00000494052 532 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PDLIM1O00151 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PDLIM1O00151 HSPE1P23-201ENST00000509838 286 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AL359273.1-201ENST00000510918 627 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.87□□□□□ -1.95
PDLIM1O00151 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.87□□□□□ -1.95
PDLIM1O00151 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
PDLIM1O00151 SCARNA13-201ENST00000516672 275 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 FAM60DP-201ENST00000524174 632 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 DEFB108D-201ENST00000527787 222 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.87□□□□□ -1.95
PDLIM1O00151 HIGD1AP1-201ENST00000550979 275 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.87□□□□□ -1.95
PDLIM1O00151 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.87□□□□□ -1.95
PDLIM1O00151 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.87□□□□□ -1.95
PDLIM1O00151 BNIP3P22-201ENST00000593399 556 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 BNIP3P23-201ENST00000599655 511 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AL606834.2-201ENST00000602954 668 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AL356575.1-201ENST00000603008 283 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AL357094.1-201ENST00000603845 844 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AC097468.3-201ENST00000607956 456 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PDLIM1O00151 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PDLIM1O00151 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PDLIM1O00151 ZNF271P-202ENST00000465539 1970 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AP000526.1-201ENST00000603308 1388 ntBASIC2.87□□□□□ -1.95
PDLIM1O00151 AL161431.1-201ENST00000618966 4205 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.86□□□□□ -1.95
PDLIM1O00151 AC104454.1-201ENST00000421341 1401 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PDLIM1O00151 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDLIM1O00151 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PDLIM1O00151 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PDLIM1O00151 U3.42-201ENST00000408746 214 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 MIR1289-1-201ENST00000408836 144 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDLIM1O00151 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 RPL27AP8-201ENST00000424277 446 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms