Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.87□□□□□ -2.11
RGPD3A6NKT7 RNA5SP139-201ENST00000364340 117 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 SNRPEP2-201ENST00000397592 279 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 Z85994.2-201ENST00000434327 452 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.87□□□□□ -2.11
RGPD3A6NKT7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RGPD3A6NKT7 AC007115.1-201ENST00000546853 234 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 MIR5694-201ENST00000581190 76 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 AL391646.1-201ENST00000603860 190 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 AC080078.3-201ENST00000605407 463 ntBASIC1.87□□□□□ -2.11
RGPD3A6NKT7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RGPD3A6NKT7 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.86□□□□□ -2.11
RGPD3A6NKT7 RPL21P66-201ENST00000426566 466 ntBASIC1.86□□□□□ -2.11
RGPD3A6NKT7 UBBP3-201ENST00000445497 241 ntBASIC1.86□□□□□ -2.11
RGPD3A6NKT7 RPL37P6-202ENST00000464216 403 ntBASIC1.86□□□□□ -2.11
RGPD3A6NKT7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.86□□□□□ -2.11
RGPD3A6NKT7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.86□□□□□ -2.11
RGPD3A6NKT7 MTCO1P47-201ENST00000523889 1271 ntBASIC1.86□□□□□ -2.11
RGPD3A6NKT7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.86□□□□□ -2.11
RGPD3A6NKT7 AC002487.1-201ENST00000604565 994 ntBASIC1.86□□□□□ -2.11
RGPD3A6NKT7 AL161734.1-201ENST00000609720 557 ntBASIC1.86□□□□□ -2.11
RGPD3A6NKT7 AC140725.3-201ENST00000616193 880 ntBASIC1.86□□□□□ -2.11
RGPD3A6NKT7 MKKS-204ENST00000639674 192 ntBASIC1.86□□□□□ -2.11
RGPD3A6NKT7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.86□□□□□ -2.11
RGPD3A6NKT7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RGPD3A6NKT7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 AL138880.1-201ENST00000405824 642 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 TPMTP3-201ENST00000411928 735 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 AC008885.2-201ENST00000509506 930 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 AC139103.1-201ENST00000534696 1030 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 MIR4496-201ENST00000635896 61 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 AC073055.1-201ENST00000456901 1621 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 RNU6-1032P-201ENST00000384100 107 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 MIR627-201ENST00000384979 97 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 RPS6P15-201ENST00000431996 751 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 RPS29P1-201ENST00000465274 159 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 RPL23AP41-201ENST00000484754 458 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 AC125611.2-201ENST00000551907 647 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 CDC27P3-201ENST00000635418 1910 ntBASIC1.85□□□□□ -2.11
RGPD3A6NKT7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RGPD3A6NKT7 MTCO1P4-201ENST00000520516 1409 ntBASIC1.84□□□□□ -2.11
RGPD3A6NKT7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
RGPD3A6NKT7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
RGPD3A6NKT7 AL596028.1-201ENST00000326971 197 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 RNU6-50P-201ENST00000362356 103 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 AC241520.1-201ENST00000422654 1099 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
RGPD3A6NKT7 AP002345.1-201ENST00000456493 928 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.84□□□□□ -2.12
RGPD3A6NKT7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.84□□□□□ -2.12
RGPD3A6NKT7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.84□□□□□ -2.12
RGPD3A6NKT7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.84□□□□□ -2.12
RGPD3A6NKT7 AC011712.1-201ENST00000588959 234 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 AC007229.1-201ENST00000590455 412 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 AC096586.2-201ENST00000610260 441 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.84□□□□□ -2.12
RGPD3A6NKT7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.12
RGPD3A6NKT7 ICE2P2-201ENST00000483823 2787 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 Z82195.2-201ENST00000612348 18351 ntBASIC1.84□□□□□ -2.12
RGPD3A6NKT7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RGPD3A6NKT7 SNORA67.1-201ENST00000364749 141 ntBASIC1.83□□□□□ -2.12
RGPD3A6NKT7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.83□□□□□ -2.12
RGPD3A6NKT7 RPL26P37-201ENST00000411983 438 ntBASIC1.83□□□□□ -2.12
RGPD3A6NKT7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.83□□□□□ -2.12
RGPD3A6NKT7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
RGPD3A6NKT7 AL121871.1-201ENST00000443413 436 ntBASIC1.83□□□□□ -2.12
RGPD3A6NKT7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.83□□□□□ -2.12
RGPD3A6NKT7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.83□□□□□ -2.12
RGPD3A6NKT7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.83□□□□□ -2.12
RGPD3A6NKT7 AL390240.1-201ENST00000612950 384 ntBASIC1.83□□□□□ -2.12
RGPD3A6NKT7 AL138880.2-201ENST00000616214 239 ntBASIC1.83□□□□□ -2.12
RGPD3A6NKT7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
RGPD3A6NKT7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
RGPD3A6NKT7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RGPD3A6NKT7 RNU4-41P-201ENST00000364426 143 ntBASIC1.82□□□□□ -2.12
RGPD3A6NKT7 MIR548J-201ENST00000408833 112 ntBASIC1.82□□□□□ -2.12
RGPD3A6NKT7 MTCYBP45-201ENST00000435243 565 ntBASIC1.82□□□□□ -2.12
RGPD3A6NKT7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.82□□□□□ -2.12
RGPD3A6NKT7 HMGN1P8-201ENST00000463578 288 ntBASIC1.82□□□□□ -2.12
RGPD3A6NKT7 MTND3P6-201ENST00000485242 339 ntBASIC1.82□□□□□ -2.12
RGPD3A6NKT7 AC097468.3-201ENST00000607956 456 ntBASIC1.82□□□□□ -2.12
RGPD3A6NKT7 AC083806.3-201ENST00000614016 455 ntBASIC1.82□□□□□ -2.12
RGPD3A6NKT7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.82□□□□□ -2.12
RGPD3A6NKT7 AC068831.7-201ENST00000616954 363 ntBASIC1.82□□□□□ -2.12
RGPD3A6NKT7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RGPD3A6NKT7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms