Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC084357.1-201ENST00000473404 255 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC078785.3-201ENST00000476607 425 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 UBE2CP3-201ENST00000502715 450 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 HSPD1P15-201ENST00000505573 1122 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC114797.1-201ENST00000514003 728 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 RNU6-579P-201ENST00000516879 102 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AP003385.6-201ENST00000531603 374 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AL133271.1-201ENST00000538229 291 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC018638.8-201ENST00000588755 281 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC087045.1-201ENST00000605856 382 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC010338.1-201ENST00000621823 717 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC067931.1-201ENST00000624190 671 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC006504.1-201ENST00000562493 3666 ntBASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TCRBV5S1A1TA0A578 AC006020.1-201ENST00000420179 1854 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 MAPK10-373ENST00000641983 6772 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 NACAP2-201ENST00000318548 624 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 RNU6-989P-201ENST00000362756 107 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 RN7SKP227-201ENST00000364445 330 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 Y_RNA.255-201ENST00000364581 97 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 RNU6-767P-201ENST00000384132 107 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 RNU6-39P-201ENST00000384344 107 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 MIR558-201ENST00000384920 94 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AL354719.1-201ENST00000406535 843 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 RNU6-516P-201ENST00000411381 104 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AC017079.2-201ENST00000416102 485 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 OR4K11P-201ENST00000431829 904 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 RPL35AP22-201ENST00000436855 335 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 HMGB3P9-201ENST00000441799 583 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 RPS29P31-201ENST00000446147 164 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 HMGB1P25-201ENST00000468402 607 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AC006512.1-201ENST00000468816 291 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AL163973.1-201ENST00000484753 577 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 RPS3AP50-201ENST00000487064 803 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AC105417.1-201ENST00000514691 285 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 SNORD27.1-201ENST00000516319 72 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 RANP9-201ENST00000519957 271 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 HMGN1P28-201ENST00000521340 364 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 OR4R3P-201ENST00000525084 838 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 OR8L1P-201ENST00000534005 955 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 GLYCAM1-201ENST00000546596 285 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 CR383656.7-201ENST00000548164 174 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AC128657.1-201ENST00000549459 145 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AL133153.1-201ENST00000557756 303 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 OR4K8P-201ENST00000578842 1048 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AL669831.4-202ENST00000590817 238 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AL031176.1-201ENST00000604554 466 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AL158211.4-201ENST00000606988 584 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AC099669.2-201ENST00000616549 437 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 AC119674.1-207ENST00000641355 633 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TCRBV5S1A1TA0A578 MTCO1P9-201ENST00000505577 1534 ntBASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 RPL7P26-201ENST00000333817 754 ntBASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 HSPE1P11-201ENST00000339579 310 ntBASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 Y_RNA.813-201ENST00000364639 102 ntBASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 RNU6-996P-201ENST00000365438 107 ntBASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 RNU6-432P-201ENST00000384196 109 ntBASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV5S1A1TA0A578 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms