Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 PARP1P2-201ENST00000556806 195 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC002545.1-201ENST00000592511 181 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC005261.5-201ENST00000596280 355 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC174048.1-201ENST00000603389 144 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC079587.1-201ENST00000603846 277 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL160290.3-201ENST00000604869 165 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 Z98200.1-201ENST00000607298 470 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC022893.3-201ENST00000607665 437 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC114781.5-201ENST00000615297 108 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR6891-201ENST00000618788 93 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC007546.2-201ENST00000623996 360 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC103710.2-202ENST00000641454 2853 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
IGHV4-28A0A0C4DH34 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
IGHV4-28A0A0C4DH34 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.142-201ENST00000363491 102 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-522P-201ENST00000364497 107 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.378-201ENST00000365652 113 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC068538.1-201ENST00000376856 336 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL139039.1-201ENST00000401900 692 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL592114.1-201ENST00000403842 483 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL139397.2-201ENST00000404529 772 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 HDGFP1-201ENST00000405943 252 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL513331.1-201ENST00000411908 397 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 BTF3L4P3-201ENST00000418879 476 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 PDCL2P1-201ENST00000419302 352 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC245054.1-201ENST00000420944 258 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL353678.1-201ENST00000422735 741 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC091390.3-201ENST00000426478 338 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC091390.1-201ENST00000433904 331 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL23AP52-201ENST00000439311 478 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 PRDX3P3-201ENST00000447765 522 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC104058.1-201ENST00000448028 297 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 SCARNA18-201ENST00000459004 134 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC004801.2-202ENST00000463559 283 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP000942.1-201ENST00000463969 747 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 PARP4P3-201ENST00000510265 317 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC005921.1-201ENST00000510589 286 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL359273.1-201ENST00000510918 627 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 TTC39CP1-201ENST00000512513 755 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC108043.1-201ENST00000512696 574 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 RANP9-201ENST00000519957 271 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL23AP87-202ENST00000573039 466 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR3939-201ENST00000582614 106 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL117336.2-201ENST00000602435 335 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL138889.2-201ENST00000603883 242 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP002826.1-201ENST00000608835 315 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL731566.2-201ENST00000618971 317 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC022140.2-201ENST00000623500 188 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP004289.2-201ENST00000444413 1457 ntBASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
IGHV4-28A0A0C4DH34 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms