Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AP005639.2-201ENST00000527592 928 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 MED28P6-201ENST00000558776 231 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 MIR4529-201ENST00000578110 78 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 FAM60BP-201ENST00000578364 658 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AC011260.1-201ENST00000578420 472 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 RPAP2P1-201ENST00000603626 1168 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AC073592.7-201ENST00000623659 507 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 TPTE2P4-201ENST00000258589 1605 ntBASIC1.4□□□□□ -2.18
TRAV30A0A087WSZ9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 MTATP6P31-201ENST00000406985 692 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 RNU6-1140P-201ENST00000410517 106 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AC008173.1-201ENST00000418901 264 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AL035407.1-201ENST00000429211 571 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 OR6C72P-201ENST00000451403 892 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 snoU109.1-201ENST00000459339 135 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AC087884.1-201ENST00000469738 328 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 SNORA31.13-201ENST00000516624 135 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AC021749.1-201ENST00000604322 607 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 AC024023.1-201ENST00000624530 922 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 MKKS-204ENST00000639674 192 ntBASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV30A0A087WSZ9 RNU6-339P-201ENST00000384310 107 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AC003685.2-201ENST00000422795 395 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AL009174.1-201ENST00000426577 416 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 HSPE1P21-201ENST00000438283 308 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 RPL23AP3-201ENST00000453844 468 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 RNU7-23P-201ENST00000459465 62 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 DYNLL1P5-201ENST00000467158 270 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AC068781.1-201ENST00000488231 618 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AC112518.2-201ENST00000508565 425 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 OR5AL2P-201ENST00000532185 920 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 MIR5571-201ENST00000577998 113 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 SNRPGP19-201ENST00000603826 189 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 KATNBL1P1-201ENST00000605192 748 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AC087241.4-201ENST00000612441 480 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 AC012150.2-201ENST00000621300 544 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 MIR6852-201ENST00000621699 66 ntBASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV30A0A087WSZ9 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 ZNF702P-202ENST00000434269 1966 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 U8.2-201ENST00000363156 134 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 Y_RNA.111-201ENST00000363248 100 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 RNA5SP363-201ENST00000365072 115 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 OR1L1-202ENST00000373686 1083 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AL353729.1-201ENST00000425044 720 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AL627224.1-201ENST00000448334 444 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 RNU1-98P-201ENST00000458992 160 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AC079203.1-201ENST00000487972 404 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AC111000.5-201ENST00000506559 1178 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AC008885.2-201ENST00000509506 930 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AC021146.7-201ENST00000509604 775 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 CBX3P7-201ENST00000532876 502 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 MIR4285-201ENST00000581001 85 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 UBE2L4-201ENST00000587688 464 ntBASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV30A0A087WSZ9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 RNU6-452P-201ENST00000384406 107 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 Y_RNA.500-201ENST00000384466 111 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 RNU2-17P-201ENST00000410290 190 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms