Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 AP000756.2-201ENST00000624168 2567 ntBASIC4.84□□□□□ -1.64
CAPN6Q9Y6Q1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CAPN6Q9Y6Q1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RNA5SP22-201ENST00000365393 109 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RNU6-393P-201ENST00000384475 107 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RNU11-4P-201ENST00000391149 133 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AL445189.1-201ENST00000405722 338 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RNU2-50P-201ENST00000410494 143 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RN7SKP216-201ENST00000411050 312 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 UBE2FP1-201ENST00000416536 447 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RPL21P109-201ENST00000422213 475 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RPS12P5-201ENST00000423449 371 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AL669831.1-202ENST00000428504 417 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AC010655.1-201ENST00000449336 292 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 FABP5P13-201ENST00000452144 328 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 snoU13.20-201ENST00000459180 104 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AC107222.1-201ENST00000510899 637 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 Y_RNA.668-201ENST00000516233 93 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RPL23AP84-201ENST00000571193 464 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 MIR3176-201ENST00000582210 90 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AC005357.1-201ENST00000588399 301 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AC011445.2-201ENST00000599274 173 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AL109918.3-201ENST00000603072 338 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 AC116447.1-201ENST00000613153 453 ntBASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN6Q9Y6Q1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AC068254.2-201ENST00000623938 3577 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 RNA5SP191-201ENST00000362585 102 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 Y_RNA.257-201ENST00000364596 102 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 SMIM11P1-201ENST00000369586 178 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 RNU6-434P-201ENST00000384376 107 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AC140479.3-201ENST00000418944 1126 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 RPL7P37-201ENST00000425095 738 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 USMG5P1-201ENST00000425964 177 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AL353597.2-202ENST00000434901 373 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 HIGD1AP11-201ENST00000438361 280 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 HMGB3P30-201ENST00000457863 606 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 RPS26P39-201ENST00000469206 341 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 RPS26P28-201ENST00000470806 348 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 RN7SL727P-201ENST00000482164 296 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AC026801.1-201ENST00000497178 464 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AC006499.3-201ENST00000506077 748 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AC022493.2-201ENST00000506122 481 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 MTCO3P44-201ENST00000510977 541 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AC104136.1-201ENST00000512969 394 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 RNU6-323P-201ENST00000521915 107 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 RN7SL652P-201ENST00000577769 300 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 AC062037.2-201ENST00000610137 73 ntBASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN6Q9Y6Q1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 AC116667.1-201ENST00000604855 2072 ntBASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 RN7SKP115-201ENST00000363177 317 ntBASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 RNA5SP123-201ENST00000363244 119 ntBASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 Y_RNA.307-201ENST00000365022 117 ntBASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 RNU4-70P-201ENST00000384579 139 ntBASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 RNU6-101P-201ENST00000410323 104 ntBASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 RNU4-65P-201ENST00000410473 140 ntBASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 RNU2-47P-201ENST00000410649 186 ntBASIC4.81□□□□□ -1.64
CAPN6Q9Y6Q1 RNA5SP111-201ENST00000411386 101 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms