Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.04□□□□□ -2.08
SCN10AQ9Y5Y9 AC074051.3-201ENST00000570238 358 ntBASIC2.04□□□□□ -2.08
SCN10AQ9Y5Y9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.04□□□□□ -2.08
SCN10AQ9Y5Y9 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.04□□□□□ -2.08
SCN10AQ9Y5Y9 AL049779.4-201ENST00000604500 156 ntBASIC2.04□□□□□ -2.08
SCN10AQ9Y5Y9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN10AQ9Y5Y9 U6.107-201ENST00000637108 79 ntBASIC2.04□□□□□ -2.08
SCN10AQ9Y5Y9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.04□□□□□ -2.08
SCN10AQ9Y5Y9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AL137003.2-201ENST00000606924 2538 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 ANAPC10P1-201ENST00000395991 556 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 RNF2P1-201ENST00000442955 1010 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AC015724.1-201ENST00000478577 156 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 OR8K4P-201ENST00000534608 872 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 MIR4303-201ENST00000581299 66 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 snoU13.31-201ENST00000607291 104 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AC106028.5-201ENST00000610332 395 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AC010678.1-201ENST00000614118 713 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 RNU6-339P-201ENST00000384310 107 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 MIR493-201ENST00000385254 89 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 RNU4-78P-201ENST00000410940 126 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 RNU6-272P-201ENST00000411028 104 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 RNA5SP270-201ENST00000411361 118 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 RPL36P19-201ENST00000430744 301 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 OR4K11P-201ENST00000431829 904 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 MTND2P21-201ENST00000436242 1042 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AC021851.1-201ENST00000608537 1082 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AC013468.1-201ENST00000608680 598 ntBASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN10AQ9Y5Y9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 MIR378A-201ENST00000362177 66 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 MIR518E-201ENST00000385252 88 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 AL356320.2-201ENST00000417263 507 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 AC011753.1-201ENST00000451001 220 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 AC015908.1-201ENST00000478739 476 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 AC090543.1-201ENST00000492168 485 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 AC090666.1-201ENST00000578241 445 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 VN1R80P-201ENST00000597126 338 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 FO624990.1-201ENST00000636373 85 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 MFSD8-245ENST00000641743 948 ntBASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SCN10AQ9Y5Y9 RNU1-105P-201ENST00000363470 161 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 RNU2-17P-201ENST00000410290 190 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 RPS3AP9-201ENST00000417027 792 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 MTND1P33-201ENST00000446251 917 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AC010099.1-201ENST00000455434 375 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 VPS26AP1-201ENST00000483197 979 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 RNU6-27P-201ENST00000516146 107 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 RPS3AP23-202ENST00000574601 686 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 U73023.1-201ENST00000603134 700 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AL121917.1-203ENST00000605534 577 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AC245884.12-201ENST00000615364 59 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AL449363.1-201ENST00000617815 186 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AP003400.6-201ENST00000624698 740 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 SDAD1P2-201ENST00000441308 2028 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 SSXP10-201ENST00000402595 565 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 AL021407.1-201ENST00000404531 386 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 EZH2P1-201ENST00000431167 291 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 RPL23AP76-201ENST00000441860 458 ntBASIC2.01□□□□□ -2.09
SCN10AQ9Y5Y9 RPS26P30-201ENST00000443431 335 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms