Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 OR13C1P-202ENST00000641378 2919 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 Y_RNA.29-201ENST00000362570 113 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 U3.7-201ENST00000363668 216 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 RNU6-827P-201ENST00000365553 106 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 RNU6-338P-201ENST00000383888 105 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 RPL21P38-201ENST00000418090 167 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 OR2AH1P-201ENST00000425717 928 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 MTCO1P39-201ENST00000426148 480 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 CYCSP6-201ENST00000434498 302 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 NDUFB1P2-201ENST00000449477 176 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 PRELID3BP1-201ENST00000457142 540 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 RN7SKP210-201ENST00000459176 261 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 RNU4-60P-201ENST00000517239 135 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AC109479.2-201ENST00000517842 174 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 IGKV2-23-201ENST00000518729 323 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AL590705.4-201ENST00000532209 134 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AC068446.3-201ENST00000555285 382 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 MRPS21P7-201ENST00000566937 238 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AL161798.1-201ENST00000604630 131 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AC012603.1-201ENST00000606424 528 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 NCAPGP1-201ENST00000505112 1814 ntBASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA11Q9Y5H2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 PCAT14-202ENST00000627127 3935 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AL391987.6-201ENST00000305671 199 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 RNA5SP46-201ENST00000362370 120 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 Y_RNA.84-201ENST00000363011 104 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 MIR621-201ENST00000384919 96 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 RNA5SP494-201ENST00000410653 129 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AL133173.1-201ENST00000423458 397 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 GAPDHP58-201ENST00000438477 1006 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AL513124.1-201ENST00000450410 614 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AL450023.1-201ENST00000450868 751 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 IFNWP4-201ENST00000453148 294 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC023141.9-201ENST00000458734 412 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 RN7SL184P-201ENST00000488308 297 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AL049874.1-201ENST00000489560 388 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 MLLT10P2-201ENST00000506434 249 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC074250.1-201ENST00000511117 192 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 ATP5F1P5-201ENST00000526403 760 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AL049872.1-201ENST00000556323 322 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 HNRNPCP4-201ENST00000571636 900 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC073410.2-201ENST00000603240 332 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC006077.1-201ENST00000604746 343 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AC099669.2-201ENST00000616549 437 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 AP000560.1-201ENST00000624150 1937 ntBASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHGA11Q9Y5H2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms