Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC119751.6-201ENST00000416712 186 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 AL139148.1-201ENST00000427122 680 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 Y_RNA.644-201ENST00000459006 113 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 RN7SL329P-201ENST00000467740 299 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 SNORD116-26-201ENST00000516006 96 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 Y_RNA.674-201ENST00000516362 113 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-255P-201ENST00000516957 105 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 RNA5SP471-201ENST00000516971 106 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 AL590705.4-201ENST00000532209 134 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 AC093023.1-201ENST00000547375 507 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 SYF2P1-201ENST00000550658 413 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 HMGN2P6-201ENST00000551091 273 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 PRPF19P1-201ENST00000584766 898 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 U6.92-201ENST00000636464 89 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 OR4F13P-202ENST00000560066 2054 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB11Q9Y5F2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 Y_RNA.83-201ENST00000363005 113 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 RNA5SP443-201ENST00000363083 132 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-512P-201ENST00000364438 103 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 RN7SKP227-201ENST00000364445 330 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-384P-201ENST00000364900 104 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-827P-201ENST00000365553 106 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 KNOP1P3-201ENST00000446933 426 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AL359273.1-201ENST00000510918 627 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AC073869.10-201ENST00000642016 354 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AL360270.2-201ENST00000562952 5985 ntBASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB11Q9Y5F2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 AP001148.1-201ENST00000624124 2359 ntBASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 AC009812.4-201ENST00000569134 1805 ntBASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 RNA5SP326-201ENST00000363209 110 ntBASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 MIR551A-201ENST00000385042 96 ntBASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 MIR190B-201ENST00000401119 79 ntBASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 AL133270.1-201ENST00000402635 279 ntBASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 MRPS21P2-201ENST00000424704 264 ntBASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHB11Q9Y5F2 BX679664.1-201ENST00000434429 253 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms