Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2.01
TRAPPC4Q9Y296 ZNF833P-201ENST00000424938 1494 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 Y_RNA.234-201ENST00000364409 97 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-157P-201ENST00000383957 107 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-1027P-201ENST00000383998 107 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 MIR135A2-201ENST00000384854 100 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 MIR128-1-201ENST00000384921 82 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 MIR483-201ENST00000385070 76 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-882P-201ENST00000391025 103 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AL096701.2-201ENST00000416920 238 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 BEND7P1-201ENST00000422058 457 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 ZYG11AP1-201ENST00000430329 837 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 CR769767.1-201ENST00000436337 346 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 Z80107.1-201ENST00000436830 412 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AC004866.2-201ENST00000438285 481 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 RPL23AP58-201ENST00000440453 469 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 MTND5P14-201ENST00000441481 1267 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AC112653.1-201ENST00000443851 386 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 BX322784.1-201ENST00000455793 1077 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 RPL23AP31-201ENST00000456160 467 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 KC877373.1-201ENST00000479066 408 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AC091951.3-201ENST00000504093 246 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 MLLT10P2-201ENST00000506434 249 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 HIGD1AP13-201ENST00000509878 289 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-150P-201ENST00000516237 95 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AC105185.1-201ENST00000518705 535 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AL133271.1-201ENST00000538229 291 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AL391156.1-201ENST00000554965 554 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AL133507.1-201ENST00000605269 557 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AC005000.2-201ENST00000605468 310 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 AC107952.2-201ENST00000606048 486 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAPPC4Q9Y296 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 TAB3P1-202ENST00000452645 1634 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-799P-201ENST00000363567 107 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-757P-201ENST00000410334 100 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 USP9YP33-201ENST00000412220 421 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 TXNL1P1-201ENST00000429528 554 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 MTND1P32-201ENST00000433043 938 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 USP9YP35-201ENST00000435696 412 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC017037.2-201ENST00000513850 890 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 RNA5SP367-201ENST00000516557 118 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 OR6C7P-201ENST00000547875 934 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 DUXAP1-201ENST00000556632 463 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 MIR4760-201ENST00000585040 80 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 ZNF861P-201ENST00000588126 639 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 TPMTP1-201ENST00000592307 737 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AL451007.1-201ENST00000595491 289 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 VN1R82P-201ENST00000601481 356 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AP001330.4-201ENST00000604350 154 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AL022099.1-201ENST00000604551 712 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC008277.2-201ENST00000605196 797 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AL158042.1-201ENST00000605338 460 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC012443.1-201ENST00000605605 231 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AC005046.1-201ENST00000608515 625 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 BX664608.1-201ENST00000610519 487 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 CRYM-AS1-204ENST00000637983 556 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 AL161431.1-201ENST00000618966 4205 ntBASIC2.51□□□□□ -2.01
TRAPPC4Q9Y296 ZNF876P-202ENST00000398732 1485 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms