Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RNU6-575P-201ENST00000411326 105 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 PMCHL1-202ENST00000423102 261 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RPL17P49-201ENST00000443728 411 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 CBWD4P-201ENST00000445695 655 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RN7SL293P-201ENST00000481765 281 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RNA5SP401-201ENST00000515920 127 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RNA5SP135-201ENST00000517019 125 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RN7SKP40-201ENST00000517211 242 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC022861.1-201ENST00000522981 663 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 GNRHR2P1-201ENST00000555315 631 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MIR5187-201ENST00000583479 76 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 TPMTP1-201ENST00000592307 737 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 uc_338.15-201ENST00000615470 191 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC110801.1-201ENST00000623590 212 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC022418.1-201ENST00000624118 445 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC055839.1-201ENST00000634467 498 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MTND5P10-201ENST00000603719 1809 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.255-201ENST00000364581 97 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 RNU6-702P-201ENST00000364982 107 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.339-201ENST00000365325 102 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 TMSB4XP8-201ENST00000402089 135 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AL121834.1-202ENST00000404494 277 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AL450338.1-201ENST00000407987 512 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 TMSB4XP6-201ENST00000415187 135 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 TMSB4XP1-201ENST00000424567 135 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 MTCYBP10-201ENST00000424905 650 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 RPL23AP25-201ENST00000430973 463 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AL451050.1-201ENST00000450126 415 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 C1DP4-201ENST00000455429 424 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 MTCO3P10-201ENST00000455912 772 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC104986.1-201ENST00000517978 436 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 BTF3P12-201ENST00000519620 469 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC013828.2-201ENST00000532487 235 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 MIR4433B-201ENST00000581329 102 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC093913.1-201ENST00000614178 329 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 RMST_9.1-201ENST00000619945 193 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC091925.1-201ENST00000623204 462 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC079597.1-201ENST00000624306 508 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 CR392039.4-201ENST00000624968 501 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 GNG5P1-201ENST00000255500 204 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.28-201ENST00000362554 111 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 RNU6-216P-201ENST00000363282 104 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 RNU6-1188P-201ENST00000363795 107 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 RNA5SP51-201ENST00000364750 119 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 SNORA19-201ENST00000384737 128 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 MIR1251-201ENST00000408552 70 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 MIR320C1-201ENST00000408566 88 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC127526.1-201ENST00000417526 366 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AC005300.1-201ENST00000428401 373 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 AL035666.1-201ENST00000446195 348 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 NPM1P39-201ENST00000449818 867 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.635-201ENST00000459041 101 ntBASIC2.92□□□□□ -1.94
NOTCH3Q9UM47 RNU6-1208P-201ENST00000459588 107 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms