Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL158032.1-201ENST00000605401 106 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AL022345.1-201ENST00000607292 135 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC012409.4-201ENST00000612923 249 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 RMST_7.1-201ENST00000621935 268 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC005858.4-201ENST00000623191 700 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 TPTEP1-208ENST00000636884 213 ntBASIC5.11□□□□□ -1.59
DDX41Q9UJV9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX41Q9UJV9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RNA5SP479-201ENST00000364858 117 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RNU6-190P-201ENST00000384154 102 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RNU6-1013P-201ENST00000384180 107 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RNU6-1181P-201ENST00000384191 106 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 Y_RNA.530-201ENST00000384587 101 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 MIR513A2-201ENST00000385249 127 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RNU6-550P-201ENST00000391057 101 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AL122016.1-201ENST00000403365 367 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AL645937.1-202ENST00000421799 937 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 MTCO1P39-201ENST00000426148 480 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC004975.1-201ENST00000428733 208 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 HMGB1P27-201ENST00000431429 603 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC133473.1-201ENST00000455173 299 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RN7SL303P-201ENST00000469773 251 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC117522.3-201ENST00000507974 584 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC098591.2-201ENST00000510152 315 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 SNORA19.2-201ENST00000516013 114 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RN7SKP21-201ENST00000516503 220 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RNU6-685P-201ENST00000517088 95 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 SNORA31.20-201ENST00000517111 133 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 SNORA31.22-201ENST00000517204 135 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC105029.1-201ENST00000520250 669 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RPL7P20-201ENST00000520308 745 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC090281.1-201ENST00000523019 276 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AL157700.1-201ENST00000561973 1432 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC106782.4-201ENST00000568264 210 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 FAM60BP-201ENST00000578364 658 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 MIR4795-201ENST00000584182 89 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC008521.1-201ENST00000587471 187 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 SNRPGP15-201ENST00000600149 222 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RPL7P50-201ENST00000600588 727 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AL132765.2-201ENST00000610812 351 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 AL359547.2-201ENST00000615810 418 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 MTND1P37-201ENST00000636562 264 ntBASIC5.1□□□□□ -1.59
DDX41Q9UJV9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
DDX41Q9UJV9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 AC009812.4-201ENST00000569134 1805 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 CPHL1P-201ENST00000461341 3407 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 AC010300.1-201ENST00000600671 5134 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RN7SKP167-201ENST00000411047 285 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RN7SKP140-201ENST00000411196 284 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RNA5SP111-201ENST00000411386 101 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RPS12P10-201ENST00000427031 377 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 MTATP6P4-201ENST00000427725 675 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 MRPL50P4-201ENST00000446432 475 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 AC020550.1-201ENST00000447385 163 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 NDUFS5P3-201ENST00000450668 321 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RNU6-329P-201ENST00000459618 107 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RN7SL98P-201ENST00000462271 300 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 AC004801.2-202ENST00000463559 283 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 AC103851.1-201ENST00000506833 274 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RBBP4P6-201ENST00000508098 202 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 Y_RNA.665-201ENST00000516177 98 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RN7SKP60-201ENST00000516985 239 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RN7SKP258-201ENST00000517151 304 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 MIR4742-201ENST00000581069 85 ntBASIC5.09□□□□□ -1.59
DDX41Q9UJV9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 RNU4-89P-201ENST00000607443 133 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms