Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AL390123.1-201ENST00000603216 237 ntBASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 RAC1P9-201ENST00000604990 392 ntBASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 AC141273.2-201ENST00000618989 130 ntBASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 AL159153.1-201ENST00000619688 317 ntBASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 AC068870.2-201ENST00000620635 389 ntBASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 AL691447.3-201ENST00000635020 330 ntBASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 ZNF72P-201ENST00000425869 1908 ntBASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 AL731566.1-201ENST00000620490 1937 ntBASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 AC104964.3-201ENST00000606115 2860 ntBASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FOXD3Q9UJU5 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 AC010615.1-201ENST00000594254 1764 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 RNU6-384P-201ENST00000364900 104 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 SNORA51.11-201ENST00000384442 131 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 Y_RNA.533-201ENST00000384596 114 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 SNORD56-201ENST00000413522 71 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 EI24P1-201ENST00000416584 867 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 ELOCP20-201ENST00000422460 345 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 TOMM20P4-201ENST00000427861 435 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 AL356867.1-201ENST00000429623 299 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 H2AFZP5-201ENST00000446960 382 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 RN7SL197P-201ENST00000466981 299 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 AL160314.1-201ENST00000490836 438 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 SNORA31.20-201ENST00000517111 133 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 HIGD1AP5-201ENST00000529959 259 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 PRPF19P1-201ENST00000584766 898 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 RPS29P30-201ENST00000600975 111 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 AC009314.1-201ENST00000603871 304 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 AC000068.2-201ENST00000608816 460 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 MIR8076-201ENST00000611401 83 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 AL360181.4-201ENST00000621752 134 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 DDX18P3-201ENST00000404856 2007 ntBASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXD3Q9UJU5 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 MAPK10-328ENST00000641553 4009 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC092681.1-201ENST00000297369 291 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 RNU6-595P-201ENST00000363944 107 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 RNU6-335P-201ENST00000364563 113 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 SNORA67-201ENST00000384423 137 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 Y_RNA.518-201ENST00000384552 113 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 MIR628-201ENST00000385229 95 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 MT-TW-201ENST00000387382 68 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AL022722.2-201ENST00000402519 180 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AL592148.1-201ENST00000413568 445 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC093655.2-201ENST00000425735 631 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC091390.3-201ENST00000426478 338 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 NDUFB4P8-201ENST00000435351 367 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC073465.2-201ENST00000440938 498 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC005532.2-201ENST00000467154 373 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 RPL7P5-201ENST00000471472 736 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AC072052.1-201ENST00000496556 306 ntBASIC4.87□□□□□ -1.63
FOXD3Q9UJU5 AL359273.1-201ENST00000510918 627 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms