Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AZGP1P2-201ENST00000454506 345 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AL389915.2-201ENST00000454576 441 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 BX284632.1-201ENST00000478218 541 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AL049874.1-201ENST00000489560 388 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 RNU6-1338P-201ENST00000516328 91 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 NDUFB4P11-201ENST00000560510 395 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AC234771.5-201ENST00000600161 514 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AC010900.2-201ENST00000604508 210 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AC000095.2-202ENST00000637415 154 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AC073869.10-201ENST00000642016 354 ntBASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LIMD1Q9UGP4 AL592437.2-201ENST00000421655 2434 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 snoU2_19.2-201ENST00000363024 80 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RN7SKP227-201ENST00000364445 330 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 Y_RNA.274-201ENST00000364714 101 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RNU6-662P-201ENST00000384253 104 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RNU6-886P-201ENST00000384319 105 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 SNORA67-201ENST00000384423 137 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 MIR215-201ENST00000384858 110 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 MIR551A-201ENST00000385042 96 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 MIR34A-201ENST00000385130 110 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RPL21P75-201ENST00000396599 483 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RPL21P28-201ENST00000401418 483 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AL590556.1-201ENST00000423231 483 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AC108075.1-201ENST00000424692 529 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AL049745.1-201ENST00000433953 286 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AC009220.1-201ENST00000451614 275 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 IFNWP4-201ENST00000453148 294 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AL136097.1-201ENST00000456945 913 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AL445433.1-201ENST00000457507 257 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RPL21P11-201ENST00000461458 483 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RPL21P39-201ENST00000463605 483 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RPS23P2-201ENST00000463671 415 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AC132942.1-201ENST00000486753 483 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AC093591.1-201ENST00000491435 481 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RPL21P16-201ENST00000495531 483 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RNU7-175P-201ENST00000515915 61 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 Y_RNA.706-201ENST00000516933 99 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 SYF2P1-201ENST00000550658 413 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 MIR4300-201ENST00000581016 96 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AC105254.2-201ENST00000603636 436 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AL139395.1-201ENST00000603662 160 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AL161629.2-201ENST00000615347 275 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AL450472.1-202ENST00000637286 180 ntBASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIMD1Q9UGP4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 OR4G2P-202ENST00000641004 1759 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 Y_RNA.464-201ENST00000384282 110 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 RNU11-201ENST00000387069 134 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 SNORA12.2-201ENST00000391040 156 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 DUTP5-201ENST00000406790 469 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 RPS11P7-201ENST00000442125 465 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 AC013470.1-201ENST00000453438 462 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 AC079354.2-201ENST00000453523 154 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 FABP5P15-201ENST00000453566 214 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 AC004129.2-201ENST00000457229 287 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 AC006463.2-201ENST00000473326 348 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 AL160314.1-201ENST00000490836 438 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 MLLT10P2-201ENST00000506434 249 ntBASIC5.78□□□□□ -1.48
LIMD1Q9UGP4 AC126615.2-201ENST00000553003 515 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms