Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 MTCO3P13-201ENST00000577757 781 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 NIFKP6-201ENST00000598115 845 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC022022.2-201ENST00000602989 360 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 LINC02211-204ENST00000642024 1070 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AP003122.5-201ENST00000527668 3766 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 RNU1-112P-201ENST00000364401 164 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 Y_RNA.318-201ENST00000365131 97 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 MIR181A2-201ENST00000384863 110 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 RPS15AP38-201ENST00000413110 372 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 MUPP-201ENST00000438111 566 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 GSTA11P-201ENST00000452866 669 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 RPL23AP11-201ENST00000475260 469 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 RPL30P14-201ENST00000482744 348 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC114981.1-201ENST00000503897 678 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 HMGB1P28-201ENST00000507778 552 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC113420.1-201ENST00000507903 571 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 MRPS36P3-201ENST00000519284 130 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC145350.1-201ENST00000567426 208 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 MIR4319-201ENST00000577285 85 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 RPP40P2-201ENST00000603596 712 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 Z94722.1-201ENST00000604328 474 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AL035413.2-201ENST00000604801 525 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC106028.5-201ENST00000610332 395 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC025588.4-201ENST00000615802 908 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLIP2Q9UDT6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AC092593.1-201ENST00000515413 1815 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 RNU6-173P-201ENST00000364215 104 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 SNORA1.3-201ENST00000384676 136 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 MIR512-1-201ENST00000384913 84 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 MIR513B-201ENST00000385136 84 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AL136372.1-201ENST00000403060 228 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 HMGB1P17-201ENST00000403495 628 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AC068533.2-201ENST00000411872 306 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 SSXP9-201ENST00000417503 292 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AL137014.1-201ENST00000420490 1226 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AC019178.2-201ENST00000423595 505 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 MTND5P25-201ENST00000430499 799 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 OR6K1P-201ENST00000456766 971 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 RPL9P33-201ENST00000484311 566 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 OR5AK1P-201ENST00000524837 922 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AADACP1-206ENST00000561502 1193 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AP005136.1-201ENST00000579765 429 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 RPL12P50-201ENST00000603116 116 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AC021749.1-201ENST00000604322 607 ntBASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.28□□□□□ -1.88
CLIP2Q9UDT6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
CLIP2Q9UDT6 OR4G11P-202ENST00000642116 1414 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 GABRG2-229ENST00000641017 3628 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 Y_RNA.472-201ENST00000384322 102 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 RPS4XP3-201ENST00000398541 413 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 RNU2-52P-201ENST00000410680 190 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC009518.2-201ENST00000418056 731 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC007742.1-201ENST00000425789 329 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AL590233.1-201ENST00000430017 456 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 ELOCP26-201ENST00000436067 329 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC004866.2-201ENST00000438285 481 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms