Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CYB5AP5-201ENST00000549779 389 ntBASIC2.26□□□□□ -2.05
VAPAQ9P0L0 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.26□□□□□ -2.05
VAPAQ9P0L0 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.26□□□□□ -2.05
VAPAQ9P0L0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.26□□□□□ -2.05
VAPAQ9P0L0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.26□□□□□ -2.05
VAPAQ9P0L0 MIR3117-201ENST00000584034 78 ntBASIC2.26□□□□□ -2.05
VAPAQ9P0L0 AP001429.1-201ENST00000602568 530 ntBASIC2.26□□□□□ -2.05
VAPAQ9P0L0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.26□□□□□ -2.05
VAPAQ9P0L0 AL583856.2-201ENST00000606298 543 ntBASIC2.26□□□□□ -2.05
VAPAQ9P0L0 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.26□□□□□ -2.05
VAPAQ9P0L0 U4.3-201ENST00000621047 82 ntBASIC2.26□□□□□ -2.05
VAPAQ9P0L0 AP003399.1-201ENST00000637534 361 ntBASIC2.26□□□□□ -2.05
VAPAQ9P0L0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
VAPAQ9P0L0 AC097714.1-201ENST00000511272 1647 ntBASIC2.26□□□□□ -2.05
VAPAQ9P0L0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VAPAQ9P0L0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VAPAQ9P0L0 AC007785.2-201ENST00000598627 1916 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 MIR128-1-201ENST00000384921 82 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 MIR506-201ENST00000384998 124 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AL513475.1-201ENST00000406602 315 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 DPRXP1-201ENST00000426312 460 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AC104389.3-201ENST00000445629 235 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 BMI1P1-201ENST00000445879 941 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AC090096.1-201ENST00000489168 390 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 TMEM251P1-201ENST00000503717 318 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 SUMO2P6-201ENST00000505273 288 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 HMGB3P3-201ENST00000510526 400 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AC113155.1-201ENST00000511141 769 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 SCARNA15.2-201ENST00000516409 127 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AC007115.1-201ENST00000546853 234 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 VN1R78P-201ENST00000597393 564 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 VN1R92P-201ENST00000598511 928 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AC093838.1-201ENST00000613014 469 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AC092608.2-201ENST00000624427 218 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 AC087821.2-201ENST00000637086 450 ntBASIC2.25□□□□□ -2.05
VAPAQ9P0L0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VAPAQ9P0L0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 MTCO1P9-201ENST00000505577 1534 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 RPL21P132-201ENST00000331267 462 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 SNRPEP3-201ENST00000338402 276 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 SNORA68.1-201ENST00000364537 132 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 RNU6-443P-201ENST00000384780 107 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AL592310.1-201ENST00000414330 671 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 MRPL42P6-201ENST00000486397 371 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC090453.1-201ENST00000495560 436 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC026801.2-201ENST00000515352 425 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 ATP5F1P5-201ENST00000526403 760 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 GTF3AP2-201ENST00000557014 266 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 TRAV28-201ENST00000557548 323 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 MIR4637-201ENST00000582405 84 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC005776.1-201ENST00000603164 290 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AL033523.1-201ENST00000605153 153 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AL157770.1-201ENST00000623049 439 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 MKKS-204ENST00000639674 192 ntBASIC2.24□□□□□ -2.05
VAPAQ9P0L0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VAPAQ9P0L0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC016717.2-201ENST00000609089 5141 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VAPAQ9P0L0 MIR208A-201ENST00000362287 71 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 SNORA36C-201ENST00000384289 132 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AF274854.1-201ENST00000413236 615 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.23□□□□□ -2.05
VAPAQ9P0L0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC098614.2-201ENST00000426040 255 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 UBE2V1P13-201ENST00000436983 439 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 CYCSP32-201ENST00000440548 321 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AL049734.2-201ENST00000441066 616 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.23□□□□□ -2.05
VAPAQ9P0L0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms