Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC006539.3-201ENST00000454258 129 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AC104472.2-201ENST00000469035 601 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 RN7SL442P-201ENST00000473804 320 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 MRPS33P3-201ENST00000513456 322 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AC010265.1-201ENST00000513509 211 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AC005951.2-201ENST00000576282 495 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AC073657.2-201ENST00000605661 303 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AL360219.1-201ENST00000610230 366 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 MIR6075-201ENST00000620782 95 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 MAPK10-322ENST00000641485 4530 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 Y_RNA.97-201ENST00000363094 102 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 RNU6-799P-201ENST00000363567 107 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 RNA5SP139-201ENST00000364340 117 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 RNU1-39P-201ENST00000383897 165 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AL049545.1-201ENST00000401856 572 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 RNU2-33P-201ENST00000410344 192 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC107081.1-201ENST00000414975 361 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 Z99497.1-201ENST00000421282 135 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC012498.1-201ENST00000424037 437 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC005326.1-201ENST00000429197 123 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 YME1L1P1-201ENST00000429435 297 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AL049734.2-201ENST00000441066 616 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 BMI1P1-201ENST00000445879 941 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 Z99127.3-201ENST00000448158 395 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 MTCO1P42-201ENST00000457379 726 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AL031183.1-201ENST00000457667 207 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC112204.1-201ENST00000502591 103 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 MTCYBP35-201ENST00000503630 1137 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 MTND4LP22-201ENST00000508209 276 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 RNU6-201P-201ENST00000517100 61 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 RNU6-232P-201ENST00000517144 64 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC091489.2-201ENST00000566263 604 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 MIR3186-201ENST00000577404 85 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC019176.2-201ENST00000611579 315 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC100793.4-201ENST00000613683 429 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AL356266.1-201ENST00000623311 483 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC073308.1-201ENST00000623696 305 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC093591.3-201ENST00000634516 308 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.61□□□□□ -1.83
BLOC1S4Q9NUP1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AL355596.1-201ENST00000565399 3996 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 RNU6-1284P-201ENST00000363701 100 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 RNA5SP267-201ENST00000364893 126 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 MIR325-201ENST00000385260 98 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 RNA5SP252-201ENST00000391131 119 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 SAR1AP2-201ENST00000392696 594 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 MRPL50P2-201ENST00000416821 482 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC006366.1-201ENST00000422002 759 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AL365203.2-201ENST00000423444 196 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 RPS6P15-201ENST00000431996 751 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AL353705.1-201ENST00000433468 480 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 RPL22P17-201ENST00000438729 315 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AL512286.1-201ENST00000439244 400 ntBASIC3.6□□□□□ -1.83
BLOC1S4Q9NUP1 AC005094.1-201ENST00000440420 368 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms