Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RPL21P9-201ENST00000556149 474 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 BPIFA4P-203ENST00000603168 689 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 MIR6861-201ENST00000618657 64 ntBASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRDM9Q9NQV7 PHKBP1-201ENST00000450951 1951 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 SAGE2P-201ENST00000420011 2126 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 NCAPGP1-201ENST00000505112 1814 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 PARP4P2-201ENST00000446672 3326 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 RNU5A-1-201ENST00000362698 116 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 Y_RNA.75-201ENST00000362927 97 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 SNORA36C-201ENST00000384289 132 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 RNU6-882P-201ENST00000391025 103 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 AL035660.1-201ENST00000422041 222 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 RPS27AP12-201ENST00000429552 465 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 AL627311.1-201ENST00000431514 115 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 AC009296.1-201ENST00000443146 155 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 HLA-DPA3-207ENST00000454398 229 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 RNU1-88P-201ENST00000459274 128 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 AC022795.1-201ENST00000473808 480 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 RN7SKP49-201ENST00000516675 260 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 RNA5SP471-201ENST00000516971 106 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 AL360181.4-201ENST00000621752 134 ntBASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRDM9Q9NQV7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 RNA5SP197-201ENST00000363357 119 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 RNA5SP213-201ENST00000391031 106 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 BTF3L4P2-201ENST00000392798 346 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 MIR1203-201ENST00000408812 85 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 CR769767.1-201ENST00000436337 346 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 MRPS10P1-201ENST00000448483 130 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AC090602.1-201ENST00000469695 252 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 RPS27AP9-201ENST00000477681 438 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 RN7SL57P-201ENST00000493687 290 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 MIR2117-201ENST00000516780 80 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AC126615.2-201ENST00000553003 515 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AC233702.2-202ENST00000562547 291 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AC055872.1-201ENST00000570978 278 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 TXNP4-201ENST00000575018 310 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 MIR548X2-201ENST00000579776 100 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AC010928.2-201ENST00000588017 287 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AL645944.1-201ENST00000603857 493 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AL121839.2-201ENST00000565058 6943 ntBASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRDM9Q9NQV7 AC116096.1-201ENST00000566804 2314 ntBASIC5.54□□□□□ -1.52
PRDM9Q9NQV7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRDM9Q9NQV7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRDM9Q9NQV7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRDM9Q9NQV7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRDM9Q9NQV7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRDM9Q9NQV7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.54□□□□□ -1.52
PRDM9Q9NQV7 AC004656.1-201ENST00000568479 4951 ntBASIC5.54□□□□□ -1.52
PRDM9Q9NQV7 AC133552.1-201ENST00000569988 4007 ntBASIC5.54□□□□□ -1.52
PRDM9Q9NQV7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms