Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC008669.1-201ENST00000565823 2178 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 RPL21P132-201ENST00000331267 462 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 RNA5SP393-201ENST00000363423 117 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 RNU1-51P-201ENST00000365345 176 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 SNORA9-201ENST00000384215 133 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 SNORA44-201ENST00000384584 132 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 MIR620-201ENST00000385232 95 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AL031679.1-201ENST00000400616 525 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 SNORA11-201ENST00000408789 128 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 BEND7P1-201ENST00000422058 457 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC090774.1-201ENST00000435925 246 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 RPL26P6-201ENST00000440913 438 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 RPS24P13-201ENST00000442520 397 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 RPS3AP12-201ENST00000443616 753 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AL513328.1-201ENST00000446460 224 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 EXOSC3P1-201ENST00000448649 500 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC009961.3-201ENST00000449832 765 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 RPL18AP17-201ENST00000455326 198 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AL135752.1-201ENST00000479477 471 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 RPL30P5-201ENST00000494923 336 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC147055.4-201ENST00000504399 745 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC017037.2-201ENST00000513850 890 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 OR1M4P-201ENST00000589199 287 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC079089.3-201ENST00000603094 673 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AL645944.1-201ENST00000603857 493 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AC090132.2-201ENST00000615881 347 ntBASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.27□□□□□ -2.05
EXOSC4Q9NPD3 AL022578.1-201ENST00000439330 1433 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 DEFB108F-201ENST00000344638 222 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 RNU6-343P-201ENST00000364709 104 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 RNU6-952P-201ENST00000391164 108 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 RNA5SP21-201ENST00000410917 96 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AL592148.1-201ENST00000413568 445 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AL592310.1-201ENST00000414330 671 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 RPLP0P7-201ENST00000416050 667 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 MTCO2P17-201ENST00000424336 677 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC092427.1-202ENST00000430569 476 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC098826.1-201ENST00000433943 471 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 THAP5P1-201ENST00000439089 262 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AL714022.1-201ENST00000439897 151 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AL358794.1-201ENST00000445689 381 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 FCF1P6-201ENST00000456841 595 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AL049714.1-201ENST00000466686 347 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 S100A11P2-201ENST00000467589 312 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC116337.2-201ENST00000477662 156 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 HSPA8P13-201ENST00000523715 472 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 DEFB108D-201ENST00000527787 222 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 OR5BN1P-201ENST00000532955 829 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 PRELID2P1-201ENST00000552837 301 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 MTCYBP23-201ENST00000558717 1102 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC068135.2-201ENST00000569293 1028 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 MIR5194-201ENST00000582634 120 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC006213.4-201ENST00000616184 634 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC140725.3-201ENST00000616193 880 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC090772.4-201ENST00000623599 362 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC231657.1-201ENST00000624313 397 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC010608.3-201ENST00000625048 527 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 AC097714.1-201ENST00000511272 1647 ntBASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.26□□□□□ -2.05
EXOSC4Q9NPD3 TPTE2P4-201ENST00000258589 1605 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 MTND4P9-201ENST00000507819 1346 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 MIR208A-201ENST00000362287 71 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 RNU6-28P-201ENST00000362378 107 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 SNORD116.1-201ENST00000365628 92 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 RNU2-43P-201ENST00000410306 190 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 RNU4-22P-201ENST00000411058 166 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms