Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.35□□□□□ -2.03
HMG20AQ9NP66 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.35□□□□□ -2.03
HMG20AQ9NP66 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HMG20AQ9NP66 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
HMG20AQ9NP66 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.35□□□□□ -2.03
HMG20AQ9NP66 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC093536.2-201ENST00000565257 1406 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC073346.2-201ENST00000624724 2058 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 EEF1A1P41-201ENST00000414667 207 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 SSR1P2-201ENST00000415208 787 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC024082.2-201ENST00000434771 238 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 SDCBPP1-201ENST00000440192 890 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 MTND5P14-201ENST00000441481 1267 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC002381.1-201ENST00000447049 280 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 CACYBPP2-201ENST00000453625 678 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 DUXAP8-207ENST00000456786 622 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 RPL30P9-201ENST00000465586 330 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 RPS29P26-201ENST00000477483 171 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 GTF2IP9-201ENST00000502460 301 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC109464.2-201ENST00000510242 943 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 SNORA70.16-201ENST00000516390 95 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 RNA5SP82-201ENST00000516707 92 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC022690.1-201ENST00000526681 550 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 MTND1P8-201ENST00000571424 950 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 MIR4325-201ENST00000583049 90 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 MIR4635-201ENST00000583759 79 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.34□□□□□ -2.03
HMG20AQ9NP66 RPP40P2-201ENST00000603596 712 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC012468.1-201ENST00000604888 430 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC012443.1-201ENST00000605605 231 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC144521.1-201ENST00000607148 956 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC080013.4-201ENST00000607624 649 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 DUXAP10-204ENST00000612052 616 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AL590099.1-201ENST00000615276 138 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AL596245.1-201ENST00000618994 362 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 AC109809.1-201ENST00000619665 545 ntBASIC2.34□□□□□ -2.03
HMG20AQ9NP66 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
HMG20AQ9NP66 ZNF807-201ENST00000328088 1707 ntBASIC2.34□□□□□ -2.04
HMG20AQ9NP66 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
HMG20AQ9NP66 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC009812.4-201ENST00000569134 1805 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 RNU6-289P-201ENST00000364093 107 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 SNORD46.1-201ENST00000364139 104 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 Y_RNA.234-201ENST00000364409 97 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 RNU6-621P-201ENST00000364752 109 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 RPS3AP24-201ENST00000407896 734 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 BEND7P1-201ENST00000422058 457 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AL139132.1-201ENST00000431587 344 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 SNRPEP4-201ENST00000435815 279 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC004866.2-201ENST00000438285 481 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 THAP5P1-201ENST00000439089 262 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 OR6K5P-201ENST00000447050 945 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 MTND1P31-201ENST00000449206 961 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 RNA5SP310-201ENST00000459084 116 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 RN7SKP40-201ENST00000517211 242 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC100870.1-201ENST00000522035 505 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC022080.3-201ENST00000544433 482 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 BBIP1P1-201ENST00000602999 279 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AL392048.1-201ENST00000613946 534 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AL442067.2-201ENST00000614033 363 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC013470.4-201ENST00000619978 986 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 AC099786.3-201ENST00000565735 1410 ntBASIC2.33□□□□□ -2.04
HMG20AQ9NP66 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HMG20AQ9NP66 TAB3P1-202ENST00000452645 1634 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms