Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AP003399.1-201ENST00000637534 361 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AL359693.1-201ENST00000614959 2407 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AL049641.1-201ENST00000441055 1948 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 MIR196B-201ENST00000384852 84 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AL445529.1-201ENST00000398713 389 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 RNU2-52P-201ENST00000410680 190 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 HMGN2P35-201ENST00000412164 270 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AL451074.5-201ENST00000415894 435 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC018630.2-202ENST00000422992 927 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 PTP4A1P7-201ENST00000423476 514 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 MTCO1P3-201ENST00000429327 192 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 RPL32P28-201ENST00000443577 397 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC092155.2-201ENST00000454675 477 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AL049874.1-201ENST00000489560 388 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC010486.1-201ENST00000511793 424 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 SCARNA15.2-201ENST00000516409 127 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC068135.2-201ENST00000569293 1028 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC090615.1-201ENST00000577519 154 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC013553.2-201ENST00000604244 589 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AF129408.1-201ENST00000608767 431 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC245517.5-201ENST00000611529 162 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AL109620.1-201ENST00000618738 1197 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 Z99129.2-201ENST00000619967 314 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AL049777.1-201ENST00000622740 518 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AL356473.1-201ENST00000406203 1408 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC005539.1-201ENST00000443768 1479 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 AC022336.2-201ENST00000568966 2538 ntBASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TM9SF3Q9HD45 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 RNU6-216P-201ENST00000363282 104 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AL590004.2-201ENST00000404787 371 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 LUZP4P1-201ENST00000415420 344 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 MTCYBP42-201ENST00000444653 1130 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC079776.3-201ENST00000450665 370 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC126389.1-201ENST00000477436 290 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AP001025.2-201ENST00000490908 477 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC114781.4-201ENST00000513707 639 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC017037.2-201ENST00000513850 890 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 RNU6-276P-201ENST00000516114 96 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 RNU6-1028P-201ENST00000517164 93 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 COX6CP5-201ENST00000527162 228 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC118942.1-201ENST00000529674 1035 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 RPL23AP84-201ENST00000571193 464 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AL355877.2-201ENST00000603670 358 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC011451.2-201ENST00000604303 598 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AL121652.1-201ENST00000608851 448 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC009237.15-201ENST00000610252 501 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 RNU6-1192P-201ENST00000612197 107 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC079395.3-201ENST00000615161 484 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 RNU6-489P-201ENST00000618289 107 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC009269.6-201ENST00000621778 588 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AL159972.1-201ENST00000625150 448 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 AC135776.4-201ENST00000624300 1904 ntBASIC2.81□□□□□ -1.96
TM9SF3Q9HD45 SET-203ENST00000372688 801 ntTSL 2 BASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 MIR514A1-201ENST00000385133 98 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 SNORD65.1-201ENST00000390889 71 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AL592310.1-201ENST00000414330 671 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC099548.1-201ENST00000421443 426 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 MTCO2P5-201ENST00000422621 426 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 RPS29P6-201ENST00000438196 145 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AL513043.1-201ENST00000439124 535 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 SDCBPP1-201ENST00000440192 890 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 FGF7P5-201ENST00000441829 291 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC112653.1-201ENST00000443851 386 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 FTH1P25-201ENST00000447665 469 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms