Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 RPL37P25-201ENST00000507308 276 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC017037.2-201ENST00000513850 890 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 RNU2-46P-201ENST00000517038 113 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AP003497.1-201ENST00000528472 562 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC055876.5-201ENST00000605667 259 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 RNU6-87P-201ENST00000607561 108 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AL391813.2-201ENST00000609113 322 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 CR381572.1-201ENST00000625098 102 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC244258.1-201ENST00000637553 1071 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 MTND5P33-201ENST00000571250 1450 ntBASIC3.52□□□□□ -1.85
PCDH9Q9HC56 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PCDH9Q9HC56 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 GNG5P1-201ENST00000255500 204 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 FRG1BP-201ENST00000278882 761 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 RNU6-600P-201ENST00000362524 99 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 RNA5SP295-201ENST00000362655 121 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 U8.3-201ENST00000363321 132 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 MRPL42P2-201ENST00000403169 426 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 RNA5SP107-201ENST00000411358 122 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 ELOCP17-201ENST00000414751 326 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 ATP5JP1-201ENST00000431631 322 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC108734.1-201ENST00000439549 399 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 RBMY2UP-201ENST00000453474 324 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 RPL9P33-201ENST00000484311 566 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 RNU6-201P-201ENST00000517100 61 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC016957.1-201ENST00000534895 309 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 CR383656.7-201ENST00000548164 174 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC126177.3-201ENST00000551839 688 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 SETP7-201ENST00000552169 453 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 EIF1P4-201ENST00000572664 335 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 MIR3922-201ENST00000585192 84 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 UBE2L4-201ENST00000587688 464 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AL031176.1-201ENST00000604554 466 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 IGHV3-29-201ENST00000604817 344 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC121334.2-201ENST00000605387 271 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC103710.1-201ENST00000610003 901 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AL355472.4-201ENST00000610233 626 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC012150.2-201ENST00000621300 544 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AL158801.5-201ENST00000623123 465 ntBASIC3.51□□□□□ -1.85
PCDH9Q9HC56 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PCDH9Q9HC56 AL353746.1-201ENST00000566293 6881 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 AC011460.1-201ENST00000636268 1834 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 SNORA7.2-201ENST00000364446 145 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 SNORA51.2-201ENST00000364595 132 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 RNU6-517P-201ENST00000384362 110 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 RN7SKP111-201ENST00000410349 271 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 USP9YP36-201ENST00000424581 829 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 AL358934.1-201ENST00000432346 324 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 OR2B8P-201ENST00000432841 938 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 MTND4LP10-201ENST00000435146 291 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 ARPC3P1-201ENST00000437218 533 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 HMGB1P12-201ENST00000438594 598 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 RABEPKP1-201ENST00000440529 1026 ntBASIC3.5□□□□□ -1.85
PCDH9Q9HC56 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDH9Q9HC56 snoU109.4-201ENST00000458953 143 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms