Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC114981.1-201ENST00000503897 678 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AP003385.6-201ENST00000531603 374 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 MTCO3P13-201ENST00000577757 781 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 MIR4429-201ENST00000580105 73 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 MIR3611-201ENST00000584484 83 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC078795.2-201ENST00000602835 1252 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC015871.2-201ENST00000603605 948 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 BNIP3P11-201ENST00000603878 563 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC128687.1-201ENST00000605304 619 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC004492.1-201ENST00000607036 742 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC097468.3-201ENST00000607956 456 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AP000254.1-201ENST00000609934 520 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 AC010678.1-201ENST00000614118 713 ntBASIC3.58□□□□□ -1.84
UPF2Q9HAU5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPF2Q9HAU5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 RNVU1-3-201ENST00000364313 161 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 RNU6-1119P-201ENST00000384349 108 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 MIR181A2-201ENST00000384863 110 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 MIR512-1-201ENST00000384913 84 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 MTCYBP36-201ENST00000404146 440 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AL590004.2-201ENST00000404787 371 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 Y_RNA.599-201ENST00000410489 109 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 OFD1P18Y-201ENST00000420889 959 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AL353678.1-201ENST00000422735 741 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AL035410.1-201ENST00000427409 427 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 MTND4P6-201ENST00000438297 472 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AL162389.1-201ENST00000449233 177 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 BX322784.1-201ENST00000455793 1077 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 RNU6-956P-201ENST00000458868 103 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 RPL31P13-201ENST00000484151 370 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC090453.1-201ENST00000495560 436 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC093809.1-201ENST00000509155 340 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC026412.2-201ENST00000512270 1075 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 GMPSP1-201ENST00000514075 579 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 COX6CP8-201ENST00000522620 226 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AP004371.1-201ENST00000525240 214 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC107016.2-201ENST00000547968 190 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 PCMTD1P2-201ENST00000565017 355 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 MIR544B-201ENST00000582372 78 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 AC087752.4-201ENST00000605911 462 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 LRRC77P-213ENST00000637727 880 ntBASIC3.57□□□□□ -1.84
UPF2Q9HAU5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
UPF2Q9HAU5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 MTND4P4-201ENST00000439033 1366 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 RNU6-263P-201ENST00000363811 107 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 RNU6-730P-201ENST00000383954 104 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 RNU6-348P-201ENST00000384386 107 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC083875.1-201ENST00000419509 405 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AL022238.1-201ENST00000442557 355 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC005297.2-201ENST00000450430 606 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 BTF3P5-201ENST00000457252 467 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms