Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AP003399.1-201ENST00000637534 361 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 AC118273.1-201ENST00000525324 3006 ntBASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.55□□□□□ -1.84
POLR1BQ9H9Y6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 RNU5A-1-201ENST00000362698 116 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 FCF1P10-201ENST00000407590 479 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC096664.2-201ENST00000411843 406 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 USP9YP13-201ENST00000417797 480 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 BX842559.1-201ENST00000419615 532 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AL356867.1-201ENST00000429623 299 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 NEK4P1-201ENST00000433383 879 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 MTCO3P45-201ENST00000443036 613 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 ELOCP30-201ENST00000447108 299 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 SSXP1-201ENST00000453640 473 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 snoU109.1-201ENST00000459339 135 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 RN7SL807P-201ENST00000470923 297 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC091965.2-201ENST00000512324 613 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 SNORA70.16-201ENST00000516390 95 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 DEFB108A-201ENST00000530110 222 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC103843.2-201ENST00000530523 682 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC073544.2-201ENST00000601155 540 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC087752.4-201ENST00000605911 462 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 SNORA62.6-201ENST00000606322 83 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 MIR7851-201ENST00000610611 160 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AL110115.1-201ENST00000614396 364 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 MIR8058-201ENST00000615737 89 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC048344.4-201ENST00000619744 527 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC005858.4-201ENST00000623191 700 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AL603839.4-201ENST00000624658 1005 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 PWAR6-201ENST00000552334 4618 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AC073073.2-201ENST00000609827 2578 ntBASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
POLR1BQ9H9Y6 AL021368.2-201ENST00000606125 5352 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 SNORA36C-201ENST00000384289 132 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 RNU2-62P-201ENST00000410868 191 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 RN7SKP142-201ENST00000411236 328 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 HMGN1P14-201ENST00000412459 517 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 RPL31P12-201ENST00000422587 358 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 TIMM9P1-201ENST00000436122 256 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 RPL17P49-201ENST00000443728 411 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 TAF9P1-201ENST00000445421 515 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 HMGB3P8-201ENST00000449709 577 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AL033528.1-201ENST00000453780 140 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 TAF9P2-201ENST00000454958 515 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 SNORD42A-201ENST00000459584 64 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 RPL21P10-201ENST00000463521 490 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 RPS15AP36-201ENST00000492022 382 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 RPL7P47-201ENST00000497299 556 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 FAM60DP-201ENST00000524174 632 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AP001804.3-201ENST00000525146 880 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AP000873.5-201ENST00000533906 236 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AC123904.2-201ENST00000548059 300 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 RPL21P5-201ENST00000554662 472 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 OR4H12P-201ENST00000556269 907 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 MIR548AB-201ENST00000584917 84 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AL606834.2-201ENST00000602954 668 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AP001981.2-201ENST00000603241 418 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms