Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS11Q9H270 CPHL1P-201ENST00000461341 3407 ntBASIC4.45□□□□□ -1.7
VPS11Q9H270 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS11Q9H270 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
VPS11Q9H270 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS11Q9H270 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS11Q9H270 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS11Q9H270 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
VPS11Q9H270 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS11Q9H270 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VPS11Q9H270 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 AC015813.6-201ENST00000624409 5808 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 Y_RNA.112-201ENST00000363250 102 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 Y_RNA.255-201ENST00000364581 97 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS11Q9H270 Y_RNA.557-201ENST00000384680 107 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 MIR1-2-201ENST00000384961 85 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 MIR514A2-201ENST00000385131 88 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 MIR514A3-201ENST00000385132 88 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VPS11Q9H270 SDHCP2-201ENST00000398565 501 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AL359634.1-202ENST00000404721 284 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 RNU2-8P-201ENST00000410727 190 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 RN7SKP106-201ENST00000410832 272 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 RPS20P14-201ENST00000412545 360 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC007283.2-201ENST00000424739 197 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC016712.1-201ENST00000431088 378 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS11Q9H270 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS11Q9H270 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS11Q9H270 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS11Q9H270 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS11Q9H270 ABCF2P2-201ENST00000450549 296 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS11Q9H270 BTF3P15-201ENST00000455606 336 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 RNU7-63P-201ENST00000459054 62 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC007547.1-201ENST00000462177 490 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS11Q9H270 AC090572.1-201ENST00000519251 160 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC022616.3-201ENST00000523940 148 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AP004371.1-201ENST00000525240 214 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AP003072.2-201ENST00000527756 676 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS11Q9H270 AL121603.1-201ENST00000553815 142 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC068831.4-201ENST00000556118 109 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS11Q9H270 AC099489.2-201ENST00000574976 260 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 RNU6-89P-201ENST00000606519 100 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC020634.1-201ENST00000608701 549 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 BX664608.1-201ENST00000610519 487 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 AC022418.1-201ENST00000624118 445 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS11Q9H270 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.44□□□□□ -1.7
VPS11Q9H270 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS11Q9H270 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS11Q9H270 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VPS11Q9H270 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS11Q9H270 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS11Q9H270 AL365440.1-201ENST00000436135 2167 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS11Q9H270 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS11Q9H270 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VPS11Q9H270 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS11Q9H270 RNU6-97P-201ENST00000363387 104 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 Y_RNA.149-201ENST00000363558 117 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 RNU6-379P-201ENST00000363813 104 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 Y_RNA.187-201ENST00000363918 113 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 RNU6-108P-201ENST00000365558 107 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 RNU6-1207P-201ENST00000384343 107 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS11Q9H270 CYB5AP4-201ENST00000396692 399 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 MTCYBP4-201ENST00000401524 249 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS11Q9H270 RPL36AP36-201ENST00000418616 301 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AC099677.1-201ENST00000420575 175 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS11Q9H270 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS11Q9H270 AC104837.2-201ENST00000427236 424 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AL669831.1-202ENST00000428504 417 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS11Q9H270 MRPS31P2-201ENST00000451581 518 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 MTND3P16-201ENST00000452205 344 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS11Q9H270 RPS20P32-201ENST00000456044 356 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 Y_RNA.635-201ENST00000459041 101 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AP000926.1-201ENST00000479573 241 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS11Q9H270 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS11Q9H270 RNU6-1095P-201ENST00000516148 108 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 RN7SKP295-201ENST00000517264 153 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AP005902.1-201ENST00000521358 186 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms