Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AC015795.1-201ENST00000513669 327 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 RNU7-51P-201ENST00000516560 62 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 RN7SKP295-201ENST00000517264 153 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 MTND4P7-201ENST00000523876 130 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 DYNLL1P4-201ENST00000549314 266 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AL117187.1-201ENST00000555482 181 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AL390240.1-201ENST00000612950 384 ntBASIC4.68□□□□□ -1.66
RNF38Q9H0F5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF38Q9H0F5 AC107068.1-201ENST00000563286 4218 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 AL139276.1-201ENST00000311910 1001 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 RNU1-83P-201ENST00000363426 164 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 RNU6-837P-201ENST00000391056 108 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 ARL5AP1-201ENST00000418991 388 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 MTCYBP10-201ENST00000424905 650 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 OR2AS1P-201ENST00000427827 319 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 MRPS18BP2-201ENST00000434310 759 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 AC012671.1-201ENST00000451912 203 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 SNORD108-201ENST00000459332 71 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 HMGB1P25-201ENST00000468402 607 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 AC109327.1-201ENST00000471666 403 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 RPL7P43-201ENST00000478876 753 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 RN7SL810P-201ENST00000493031 276 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 AC068305.1-201ENST00000497406 726 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 AC017037.1-201ENST00000508460 471 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 MTCYBP40-201ENST00000509390 1135 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 RNU6-566P-201ENST00000516790 107 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 RNU6-798P-201ENST00000516912 103 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 SETP7-201ENST00000552169 453 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 AC023575.1-201ENST00000580510 358 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 MIR3939-201ENST00000582614 106 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 MIR6891-201ENST00000618788 93 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 U6.114-201ENST00000636407 96 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 MTND5P19-201ENST00000424872 1794 ntBASIC4.67□□□□□ -1.66
RNF38Q9H0F5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF38Q9H0F5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 Y_RNA.167-201ENST00000363735 109 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 RNU6-1188P-201ENST00000363795 107 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 MTCYBP9-201ENST00000431021 303 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 SNRPEP4-201ENST00000435815 279 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 RN7SL98P-201ENST00000462271 300 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 RN7SL303P-201ENST00000469773 251 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AL139099.1-201ENST00000497398 403 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 Y_RNA.654-201ENST00000497848 106 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AC098591.2-201ENST00000510152 315 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 RNU6-1213P-201ENST00000517075 94 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AC008269.2-201ENST00000561915 1105 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 ATP5J2P6-201ENST00000565203 266 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 MIR4680-201ENST00000580906 66 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 SNORD91B-202ENST00000608459 222 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 AL136313.1-201ENST00000624804 202 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 MTND5P10-201ENST00000603719 1809 ntBASIC4.66□□□□□ -1.66
RNF38Q9H0F5 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF38Q9H0F5 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF38Q9H0F5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.65□□□□□ -1.66
RNF38Q9H0F5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms