Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 AC068587.4-201ENST00000533893 186 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 AC090888.1-201ENST00000561335 1141 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 AC087481.2-201ENST00000565492 330 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 AC034268.2-201ENST00000571784 482 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 AC136618.2-201ENST00000575091 400 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 OR4K8P-201ENST00000578842 1048 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 AC004832.5-201ENST00000608677 401 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 AL356266.1-201ENST00000623311 483 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 PCMTD1P7-201ENST00000634506 357 ntBASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
ZNF541Q9H0D2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AC096644.4-201ENST00000563417 2912 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 Y_RNA.234-201ENST00000364409 97 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 RNU6-920P-201ENST00000410926 92 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AC109780.2-201ENST00000413467 845 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 RPL23AP39-201ENST00000415533 405 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AL159169.1-201ENST00000421119 127 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 ARL5AP4-201ENST00000430731 512 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 RPL30P9-201ENST00000465586 330 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AP002884.2-201ENST00000471647 395 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AC011602.1-201ENST00000546484 331 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AL353997.4-201ENST00000586196 166 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AC015871.2-201ENST00000603605 948 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 Z99497.2-201ENST00000603634 310 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AC004223.4-201ENST00000612426 332 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 Z99129.2-201ENST00000619967 314 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AC007318.2-201ENST00000620999 243 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AC048347.1-201ENST00000624621 427 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 AL513185.3-201ENST00000433335 1300 ntBASIC3.56□□□□□ -1.84
ZNF541Q9H0D2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 SNORA31-201ENST00000362607 130 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 RNU6-433P-201ENST00000363216 104 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 RNU6-173P-201ENST00000364215 104 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 RNU6-343P-201ENST00000364709 104 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 MIR184-201ENST00000384962 84 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 MIR1305-201ENST00000408300 86 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 RNU6-55P-201ENST00000411092 107 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 RNU6-954P-201ENST00000411355 107 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 RNU2-71P-201ENST00000411395 189 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AC099677.1-201ENST00000420575 175 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 MTND1P30-201ENST00000441241 901 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AC112653.1-201ENST00000443851 386 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 RPL36AP33-201ENST00000450395 310 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 OR6K1P-201ENST00000456766 971 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 RPL30P6-201ENST00000475925 342 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AC022447.3-201ENST00000506865 495 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 MTND1P22-201ENST00000510572 951 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AC116347.2-201ENST00000514912 523 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 PCMTD1P2-201ENST00000565017 355 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 FAM60BP-201ENST00000578364 658 ntBASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF541Q9H0D2 GABPAP-201ENST00000419271 1356 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 RNU6-50P-201ENST00000362356 103 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 RNU6-553P-201ENST00000364047 96 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 RNU6-851P-201ENST00000384565 107 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 RNU6-328P-201ENST00000390887 106 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 RN7SKP266-201ENST00000410232 287 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 MRPL50P2-201ENST00000416821 482 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 CCDC58P2-201ENST00000417131 366 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 BX119904.4-201ENST00000424402 301 ntBASIC3.54□□□□□ -1.84
ZNF541Q9H0D2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms