Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP4Q9BWG4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
SSBP4Q9BWG4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP4Q9BWG4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP4Q9BWG4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AC010894.1-201ENST00000313760 361 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RNU1-5P-201ENST00000362684 144 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RN7SKP185-201ENST00000362813 326 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RNU6-653P-201ENST00000363074 106 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 SNORA70.6-201ENST00000383934 134 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RPL21P67-201ENST00000402896 478 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RN7SKP221-201ENST00000410420 301 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AL592148.1-201ENST00000413568 445 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RPL21P50-201ENST00000417698 477 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 MTND4LP9-201ENST00000427694 174 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AC019185.3-201ENST00000438805 323 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 ACA64.4-201ENST00000459070 127 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RNU6-1211P-201ENST00000459179 105 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RN7SL197P-201ENST00000466981 299 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RN7SL836P-201ENST00000476140 296 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RPS27AP9-201ENST00000477681 438 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 RN7SL70P-201ENST00000478322 302 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AC083795.1-201ENST00000491760 320 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AL117692.1-201ENST00000494283 713 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 GLUD1P3-202ENST00000508551 200 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 HMGB3P3-201ENST00000510526 400 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AC005520.5-201ENST00000613926 164 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AC022400.9-201ENST00000623633 273 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 DLST-216ENST00000626051 252 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 AL034546.1-201ENST00000623740 3693 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 THAP12P9-201ENST00000503971 2360 ntBASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP4Q9BWG4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 MIR412-201ENST00000362142 91 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 RNA5SP52-201ENST00000362448 134 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 SNORA63.4-201ENST00000362763 126 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 RN7SKP145-201ENST00000363291 303 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.238-201ENST00000364441 102 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 RNU6-384P-201ENST00000364900 104 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.412-201ENST00000384001 104 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 RNU1-74P-201ENST00000384108 171 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.570-201ENST00000384750 101 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 RNU2-2P-201ENST00000410396 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 SSXP9-201ENST00000417503 292 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 RPL30P13-201ENST00000418873 348 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AL133173.1-201ENST00000423458 397 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC126120.1-201ENST00000431082 470 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 PPIAP27-201ENST00000453800 265 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC079168.2-201ENST00000453977 416 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC016925.1-201ENST00000458303 298 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC022795.1-201ENST00000473808 480 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 RNU6-1234P-201ENST00000516877 103 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC126615.2-201ENST00000553003 515 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC010287.1-201ENST00000566916 357 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 MIR4472-2-201ENST00000582069 67 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 MIR3936-201ENST00000584304 110 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 RNU2-4P-201ENST00000606190 192 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AL133481.2-203ENST00000607558 139 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.15-201ENST00000611544 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.16-201ENST00000613119 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.12-201ENST00000613778 191 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms