Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC103710.4-201ENST00000609301 899 ntBASIC2.98□□□□□ -1.93
CCDC28BQ9BUN5 MIR378J-201ENST00000611988 109 ntBASIC2.98□□□□□ -1.93
CCDC28BQ9BUN5 MIR3670-4-201ENST00000612260 65 ntBASIC2.98□□□□□ -1.93
CCDC28BQ9BUN5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC28BQ9BUN5 AC009487.2-201ENST00000420969 6821 ntBASIC2.98□□□□□ -1.93
CCDC28BQ9BUN5 AL049780.3-201ENST00000624612 1583 ntBASIC2.98□□□□□ -1.93
CCDC28BQ9BUN5 MTND4P4-201ENST00000439033 1366 ntBASIC2.98□□□□□ -1.93
CCDC28BQ9BUN5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC28BQ9BUN5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 RNU5F-6P-201ENST00000362979 116 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 RNU6-1249P-201ENST00000363237 111 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 Y_RNA.201-201ENST00000364052 96 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 DEFB109C-201ENST00000382575 264 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 DEFB109B-201ENST00000382656 264 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 U8.14-201ENST00000390843 143 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 RNU4-78P-201ENST00000410940 126 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 RAB9AP3-201ENST00000412737 573 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC109780.2-201ENST00000413467 845 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 SSXP9-201ENST00000417503 292 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 RAB9AP1-201ENST00000449393 573 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 RNA5SP269-201ENST00000459032 137 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 RPL21P41-201ENST00000459863 264 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 HMGB1P36-201ENST00000487709 576 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 ELOCP31-201ENST00000540463 467 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC004486.1-201ENST00000546846 233 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 MIR4700-201ENST00000578311 74 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 BDH2P1-201ENST00000602288 736 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC100793.4-201ENST00000613683 429 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AC004696.1-201ENST00000614345 607 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 AL049781.1-201ENST00000623195 3585 ntBASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC28BQ9BUN5 ASNSP3-201ENST00000451989 1306 ntBASIC2.96□□□□□ -1.93
CCDC28BQ9BUN5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 RNA5SP124-201ENST00000362739 110 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 RPL7P25-201ENST00000404151 721 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AC063979.1-201ENST00000415539 377 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 MORF4L1P6-201ENST00000418771 268 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AC099677.1-201ENST00000420575 175 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 BX119904.4-201ENST00000424402 301 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AL445669.1-201ENST00000426743 755 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 MTND4LP10-201ENST00000435146 291 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 RPS29P6-201ENST00000438196 145 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 COX6CP12-201ENST00000446748 202 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 EPS15P1-201ENST00000448836 336 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 MTND1P9-201ENST00000453775 944 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 SNRPFP4-201ENST00000456366 242 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 MTCO2P18-201ENST00000457151 658 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 BTF3P5-201ENST00000457252 467 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 SNORD121B-201ENST00000458838 81 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 RN7SL297P-201ENST00000483161 293 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 CEACAMP10-202ENST00000495431 496 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 MTCO3P28-201ENST00000513351 515 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 PAICSP4-201ENST00000517543 1253 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms