Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AADACP1-206ENST00000561502 1193 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 AMZ2P1-203ENST00000565833 850 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 AC234778.2-201ENST00000566241 354 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 RPL23AP78-201ENST00000599928 470 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 AL158827.2-201ENST00000602494 330 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 AL160237.3-201ENST00000604114 1013 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 AC006213.4-201ENST00000616184 634 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 AC092608.2-201ENST00000624427 218 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 OR4G3P-201ENST00000633500 913 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 AL691447.3-201ENST00000635020 330 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.44□□□□□ -2.02
FOXC2Q99958 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.44□□□□□ -2.02
FOXC2Q99958 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.44□□□□□ -2.02
FOXC2Q99958 AC008264.2-201ENST00000610193 3731 ntBASIC2.44□□□□□ -2.02
FOXC2Q99958 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
FOXC2Q99958 AC108206.1-201ENST00000570186 4159 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
FOXC2Q99958 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
FOXC2Q99958 RNU6-198P-201ENST00000384258 104 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 HMGB1P17-201ENST00000403495 628 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 RN7SKP58-201ENST00000411010 305 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AL161449.1-201ENST00000414531 1199 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AL449283.1-202ENST00000418249 604 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXC2Q99958 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXC2Q99958 MTCYBP45-201ENST00000435243 565 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 TAAR7P-201ENST00000436141 242 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
FOXC2Q99958 SDCBPP1-201ENST00000440192 890 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 Z96811.1-201ENST00000445880 108 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AP000936.2-201ENST00000447151 681 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXC2Q99958 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXC2Q99958 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXC2Q99958 AC009901.1-201ENST00000506703 541 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 HMGB1P28-201ENST00000507778 552 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AC117522.3-201ENST00000507974 584 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 RNU1-143P-201ENST00000516296 146 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 RNU6-1225P-201ENST00000516336 65 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 SNORA31.21-201ENST00000517180 77 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 SNORA31.22-201ENST00000517204 135 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AC021451.1-201ENST00000523498 1129 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.43□□□□□ -2.02
FOXC2Q99958 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXC2Q99958 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXC2Q99958 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXC2Q99958 AC090615.1-201ENST00000577519 154 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 MIR4506-201ENST00000584693 77 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXC2Q99958 AC008739.2-201ENST00000597006 317 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 U1.23-201ENST00000610293 146 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AC243773.3-201ENST00000613270 256 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 RNU1-68P-201ENST00000615382 146 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AL158163.2-201ENST00000619110 700 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 MIR6130-201ENST00000619419 109 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 U1.39-201ENST00000621562 146 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AC110079.1-202ENST00000635213 138 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AC099654.9-201ENST00000637055 678 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AP000526.1-201ENST00000603308 1388 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AC005539.1-201ENST00000443768 1479 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 AC008669.1-201ENST00000565823 2178 ntBASIC2.43□□□□□ -2.02
FOXC2Q99958 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXC2Q99958 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
FOXC2Q99958 AC005832.2-201ENST00000538921 1430 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.42□□□□□ -2.02
FOXC2Q99958 AC138915.1-201ENST00000565427 1685 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.42□□□□□ -2.02
FOXC2Q99958 FAM133CP-201ENST00000332869 704 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 RNU5A-1-201ENST00000362698 116 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 U3.6-201ENST00000363622 211 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 RNA5SP68-201ENST00000363885 119 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 RNU6-270P-201ENST00000364131 105 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 snoZ40.1-201ENST00000364540 72 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
FOXC2Q99958 SNORD21-201ENST00000383953 95 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 RNU6-224P-201ENST00000384055 107 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 SNORA67.4-201ENST00000384688 142 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
FOXC2Q99958 AC106883.1-201ENST00000418805 562 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXC2Q99958 AL365496.1-201ENST00000426885 215 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 SRIP2-201ENST00000428470 166 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 EXOSC3P1-201ENST00000448649 500 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 snoU13.28-201ENST00000459235 104 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 RN7SL75P-201ENST00000461926 281 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 UBE2V1P12-201ENST00000503954 474 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXC2Q99958 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXC2Q99958 RNA5SP385-201ENST00000515947 110 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 RNU6-1282P-201ENST00000516735 96 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 AC087373.1-201ENST00000524920 491 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.42□□□□□ -2.02
FOXC2Q99958 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXC2Q99958 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXC2Q99958 AC010620.2-201ENST00000600135 313 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 AC091057.2-201ENST00000602594 792 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 AC098826.3-201ENST00000603823 466 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 AL390208.1-201ENST00000605885 644 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXC2Q99958 AL591516.1-201ENST00000611326 274 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms