Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-333P-201ENST00000459117 107 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU7-66P-201ENST00000459469 62 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AC026410.2-201ENST00000460281 156 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AP001025.2-201ENST00000490908 477 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 RPS27AP13-201ENST00000498403 237 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AC107222.1-201ENST00000510899 637 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-1213P-201ENST00000517075 94 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 MIR2116-201ENST00000517221 80 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 CYCSP29-201ENST00000533731 318 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AL356432.3-201ENST00000568952 465 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 MIR5186-201ENST00000577504 120 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 HMGB1P24-202ENST00000615653 685 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 U4.1-201ENST00000620349 87 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AL445363.3-201ENST00000623080 671 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 MIR492-201ENST00000638676 116 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC025125.1-201ENST00000624743 1922 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 RPL23AP57-201ENST00000332361 466 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 Y_RNA.367-201ENST00000365544 101 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-39P-201ENST00000384344 107 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 ARF4P3-201ENST00000397387 509 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AL359634.1-202ENST00000404721 284 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-985P-201ENST00000410182 104 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC012065.2-201ENST00000421295 375 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC233981.1-201ENST00000423224 461 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 YWHAZP8-201ENST00000436935 731 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 ABCF2P2-201ENST00000450549 296 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 RPL30P15-201ENST00000457129 321 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC104164.2-201ENST00000496953 495 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 HSPD1P15-201ENST00000505573 1122 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 COX6B1P6-201ENST00000522347 255 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 OR4T1P-201ENST00000554933 911 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AL121992.2-201ENST00000606262 256 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC092807.2-201ENST00000609367 243 ntBASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP1Q96SZ6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-1097P-201ENST00000363586 107 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RNY1P12-201ENST00000364251 105 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-702P-201ENST00000364982 107 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-1026P-201ENST00000384465 108 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 SNORD66.1-201ENST00000391230 76 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AL031679.1-201ENST00000400616 525 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AL590290.1-201ENST00000405336 380 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 MIR548K-201ENST00000408406 116 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 MTCYBP10-201ENST00000424905 650 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RPS27AP12-201ENST00000429552 465 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 COX6B1P7-201ENST00000430845 235 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 OR4K11P-201ENST00000431829 904 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC104058.1-201ENST00000448028 297 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AL356010.1-201ENST00000456364 102 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RPS29P15-201ENST00000458329 171 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RNA5SP246-201ENST00000458909 119 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RPL21P71-201ENST00000465598 459 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 GMFBP1-201ENST00000467831 427 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms