Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC091905.4-201ENST00000623432 202 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AC005005.4-201ENST00000623789 16698 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AL391516.1-201ENST00000554380 2449 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 GUCY1B2-204ENST00000531898 1979 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-834P-201ENST00000362367 110 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.71-201ENST00000362892 104 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.82-201ENST00000363000 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.92-201ENST00000363043 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.235-201ENST00000364412 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.306-201ENST00000365015 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.312-201ENST00000365089 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.322-201ENST00000365151 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-326P-201ENST00000365480 107 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 SNORD116-14-201ENST00000383894 92 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 SNORD116-17-201ENST00000383929 92 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.480-201ENST00000384364 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 SNORD116-15-201ENST00000384445 92 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 SNORD116-20-201ENST00000384529 92 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 SNORD116-19-201ENST00000384729 92 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-325P-201ENST00000411132 105 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 AL590399.2-201ENST00000427536 309 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 TOMM20P4-201ENST00000427861 435 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 TBCAP1-201ENST00000436520 327 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.650-201ENST00000459002 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 RPL37P6-202ENST00000464216 403 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 AC090602.1-201ENST00000469695 252 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 RPL31P60-201ENST00000478450 367 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 AC012123.2-201ENST00000485809 248 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 RNY3P16-201ENST00000516338 101 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.777-201ENST00000516982 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 AC103783.1-201ENST00000520506 373 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 ERHP1-201ENST00000523006 310 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.771-201ENST00000598668 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-85P-201ENST00000605989 107 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 RNA5SP439-201ENST00000617595 124 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.789-201ENST00000622480 102 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 MIR6830-201ENST00000636015 70 ntBASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP3BQ96NU0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AC079741.1-201ENST00000321498 212 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AL159987.1-201ENST00000347911 293 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-525P-201ENST00000363685 104 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNA5SP515-201ENST00000364570 118 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 U8.8-201ENST00000365399 135 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-339P-201ENST00000384310 107 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-937P-201ENST00000384325 106 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNY3P4-201ENST00000384428 101 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-45P-201ENST00000384471 107 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 SNORA37-201ENST00000384504 129 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNA5SP339-201ENST00000390987 122 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNU11-4P-201ENST00000391149 133 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 ENSAP1-201ENST00000392855 326 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.590-201ENST00000410140 107 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNU2-61P-201ENST00000411069 191 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RPS4XP5-201ENST00000419038 768 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 FABP5P13-201ENST00000452144 328 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 SNORA84-201ENST00000459229 133 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AC025755.1-201ENST00000521306 278 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms