Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SPG11Q96JI7 AL020996.3-201ENST00000606617 222 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 uc_338.12-201ENST00000616344 181 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 AL589743.1-201ENST00000551932 2712 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 MTCO1P14-201ENST00000441695 1559 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SPG11Q96JI7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 RNU6-666P-201ENST00000363499 107 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 AL357078.2-201ENST00000416486 427 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 OR51B8P-201ENST00000449892 769 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 AL353718.1-201ENST00000451028 517 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 AP003033.1-201ENST00000527244 415 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 DUXAP5-201ENST00000529668 529 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 DUXAP11-201ENST00000603858 526 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 AP000676.4-201ENST00000624659 623 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SPG11Q96JI7 MIR373-201ENST00000362273 69 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 MIRLET7G-201ENST00000362280 84 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 CKS1BP5-201ENST00000434172 273 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 NEFMP1-201ENST00000443423 1006 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 HAUS1P1-201ENST00000505275 832 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SPG11Q96JI7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 TRAV28-201ENST00000557548 323 ntBASIC1.18□□□□□ -2.22
SPG11Q96JI7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.18□□□□□ -2.22
SPG11Q96JI7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.17□□□□□ -2.22
SPG11Q96JI7 MTND4P31-201ENST00000425607 1343 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 U8.1-201ENST00000362843 134 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 MIR1304-201ENST00000408243 91 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 AL591212.2-201ENST00000433923 257 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SPG11Q96JI7 SNORA31.24-201ENST00000517232 57 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 BX322635.1-201ENST00000605804 496 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
SPG11Q96JI7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SPG11Q96JI7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SPG11Q96JI7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SPG11Q96JI7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.17□□□□□ -2.22
SPG11Q96JI7 AL445669.1-201ENST00000426743 755 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SPG11Q96JI7 AL357520.1-201ENST00000441557 453 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.17□□□□□ -2.22
SPG11Q96JI7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.17□□□□□ -2.22
SPG11Q96JI7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.17□□□□□ -2.22
SPG11Q96JI7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.17□□□□□ -2.22
SPG11Q96JI7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.17□□□□□ -2.22
SPG11Q96JI7 IMMP1LP2-201ENST00000552954 492 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.17□□□□□ -2.22
SPG11Q96JI7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
SPG11Q96JI7 AC135776.4-201ENST00000624300 1904 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 AC009541.1-201ENST00000438279 2662 ntBASIC1.17□□□□□ -2.22
SPG11Q96JI7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
SPG11Q96JI7 RPL9P9-202ENST00000466501 579 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.16□□□□□ -2.22
SPG11Q96JI7 RNU6-113P-201ENST00000516653 101 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 AC087373.1-201ENST00000524920 491 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 AP003497.1-201ENST00000528472 562 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 AP004242.1-201ENST00000533701 349 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 HSPE1P4-201ENST00000550617 308 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 AL132857.1-201ENST00000555180 708 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.16□□□□□ -2.22
SPG11Q96JI7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SPG11Q96JI7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SPG11Q96JI7 Y_RNA.48-201ENST00000362710 103 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.16□□□□□ -2.22
SPG11Q96JI7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.16□□□□□ -2.22
SPG11Q96JI7 LRRC34P2-201ENST00000514850 553 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.16□□□□□ -2.22
SPG11Q96JI7 AL159169.2-201ENST00000610061 1269 ntBASIC1.16□□□□□ -2.22
SPG11Q96JI7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.16□□□□□ -2.22
SPG11Q96JI7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SPG11Q96JI7 RNA5SP354-201ENST00000391247 136 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 SEC63P1-201ENST00000425785 1258 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 CBX3P6-201ENST00000430257 527 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC006483.1-201ENST00000487308 313 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 MTND4LP22-201ENST00000508209 276 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 MTCO3P44-201ENST00000510977 541 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AL158032.1-201ENST00000605401 106 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC017076.1-201ENST00000607613 578 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 XIAPP3-201ENST00000312918 795 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 SNORD114-23-201ENST00000363536 72 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC007390.1-201ENST00000415722 356 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms