Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX11Q96FC9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX11Q96FC9 Y_RNA.128-201ENST00000363391 112 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 RNY1P12-201ENST00000364251 105 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 RNA5SP130-201ENST00000364431 114 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 SNORD42.2-201ENST00000365570 69 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 AL359837.1-201ENST00000381357 287 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 Y_RNA.384-201ENST00000383909 102 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 Y_RNA.387-201ENST00000383918 102 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 RPL7P60-201ENST00000397636 735 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 AL024474.1-201ENST00000404655 591 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 NDUFB4P5-201ENST00000415445 361 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 AC127526.1-201ENST00000417526 366 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 RPS15AP40-201ENST00000419621 391 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 ELOCP18-201ENST00000434209 337 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 TRBV26-201ENST00000456572 344 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 RN7SL585P-201ENST00000470538 280 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 AC005726.1-201ENST00000494679 427 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DDX11Q96FC9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 OR4R1P-201ENST00000529879 463 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 AC063950.1-201ENST00000552036 308 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 LSM6P2-201ENST00000552208 177 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 AC104237.2-201ENST00000612456 443 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX11Q96FC9 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.88□□□□□ -1.63
DDX11Q96FC9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
DDX11Q96FC9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX11Q96FC9 MTND5P28-201ENST00000438005 1594 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 AL161781.1-201ENST00000354277 403 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 RNU6-28P-201ENST00000362378 107 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 RNU4-20P-201ENST00000365601 151 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX11Q96FC9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 RNU6-1160P-201ENST00000384546 104 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 RNU6-606P-201ENST00000384721 111 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 MIR1179-201ENST00000408703 91 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 RN7SKP202-201ENST00000410439 330 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 RPL31P45-201ENST00000419532 356 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 MTCYBP8-201ENST00000422855 651 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 RPL21P89-201ENST00000444021 467 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 Z95327.1-201ENST00000446082 482 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 DDX3P2-201ENST00000446138 111 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AC079781.2-201ENST00000446424 169 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AL162388.1-201ENST00000450912 352 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 Y_RNA.639-201ENST00000458981 102 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AC006517.1-201ENST00000480485 328 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AL163973.1-201ENST00000484753 577 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AC020893.1-201ENST00000502452 580 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 TXNP6-201ENST00000510190 310 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 RNU4-49P-201ENST00000516080 140 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 NARSP2-201ENST00000518524 679 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 SUMO2P20-201ENST00000520803 283 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 ELOCP31-201ENST00000540463 467 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 MIR4504-201ENST00000577413 92 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 MIR3146-201ENST00000580367 79 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AC006504.6-201ENST00000590142 199 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 AC093913.1-201ENST00000614178 329 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 MIR6875-201ENST00000617506 72 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AC090971.5-201ENST00000621102 293 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AL133216.2-202ENST00000634512 349 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 MIR6715B-201ENST00000637172 77 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX11Q96FC9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX11Q96FC9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DDX11Q96FC9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX11Q96FC9 MTCO1P9-201ENST00000505577 1534 ntBASIC4.87□□□□□ -1.63
DDX11Q96FC9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
DDX11Q96FC9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
DDX11Q96FC9 RLIMP1-201ENST00000339626 1680 ntBASIC4.86□□□□□ -1.63
DDX11Q96FC9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
DDX11Q96FC9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
DDX11Q96FC9 Y_RNA.234-201ENST00000364409 97 ntBASIC4.86□□□□□ -1.63
DDX11Q96FC9 RNU6-996P-201ENST00000365438 107 ntBASIC4.86□□□□□ -1.63
DDX11Q96FC9 SNORA4.3-201ENST00000365564 137 ntBASIC4.86□□□□□ -1.63
DDX11Q96FC9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.86□□□□□ -1.63
DDX11Q96FC9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
DDX11Q96FC9 Y_RNA.422-201ENST00000384054 114 ntBASIC4.86□□□□□ -1.63
DDX11Q96FC9 RNU6-1226P-201ENST00000384317 107 ntBASIC4.86□□□□□ -1.63
DDX11Q96FC9 RNU6-1207P-201ENST00000384343 107 ntBASIC4.86□□□□□ -1.63
DDX11Q96FC9 RNU6-39P-201ENST00000384344 107 ntBASIC4.86□□□□□ -1.63
DDX11Q96FC9 RPL21P65-201ENST00000406094 466 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms