Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNA5SP154-201ENST00000516193 111 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 RNU6-390P-201ENST00000516259 103 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 RNU6-875P-201ENST00000516488 106 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 OR5AL2P-201ENST00000532185 920 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC025627.2-201ENST00000576220 160 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AP001029.3-201ENST00000588063 596 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC011712.1-201ENST00000588959 234 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC012443.1-201ENST00000605605 231 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 RMST_3.1-201ENST00000611651 109 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 ZYXP1-201ENST00000617638 118 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC093648.1-201ENST00000623546 606 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC110801.1-201ENST00000623590 212 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CTHRC1Q96CG8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 XIAPP3-201ENST00000312918 795 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 RPL7P26-201ENST00000333817 754 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 RNA5SP130-201ENST00000364431 114 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 RNA5SP479-201ENST00000364858 117 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 RNU6-1074P-201ENST00000383995 104 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 RPL7AP73-201ENST00000413490 353 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 SSXP9-201ENST00000417503 292 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 MTCYBP8-201ENST00000422855 651 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 MTND3P23-201ENST00000431980 347 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 CBWD4P-201ENST00000445695 655 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 RPS11P1-201ENST00000451072 473 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC010631.1-201ENST00000474150 156 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC091951.2-201ENST00000500762 203 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 RPL38P4-201ENST00000502376 214 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC146944.2-203ENST00000502493 354 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 VN1R104P-201ENST00000505115 1009 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC010486.1-201ENST00000511793 424 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC139495.1-202ENST00000513164 354 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 RNA5SP503-201ENST00000517047 117 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC012182.1-201ENST00000570133 895 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 MIR4775-201ENST00000581168 75 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 FGF7P1-201ENST00000582820 288 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AL035413.2-201ENST00000604801 525 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC008945.2-201ENST00000606056 604 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC012603.1-201ENST00000606424 528 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC009994.1-201ENST00000606889 253 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC233309.1-201ENST00000619522 751 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AL773545.4-201ENST00000637262 310 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AL513478.4-201ENST00000641636 310 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AL354685.2-201ENST00000448218 1447 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC010300.1-201ENST00000600671 5134 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 AC004925.1-201ENST00000624256 2706 ntBASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CTHRC1Q96CG8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 MTND4P14-201ENST00000435799 1354 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 RIOK3P1-201ENST00000418778 1528 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 SNORD35B-201ENST00000363660 87 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 RNU6-882P-201ENST00000391025 103 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 SNORA3C-201ENST00000408792 125 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 RNU2-29P-201ENST00000410423 189 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 RNA5SP104-201ENST00000410989 118 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC068533.1-201ENST00000418542 415 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC004552.1-201ENST00000419089 348 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC245054.1-201ENST00000420944 258 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 PPP1R11P2-201ENST00000423543 382 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 HSFY6P-201ENST00000445573 403 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC073415.1-201ENST00000449240 153 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 MTND1P11-201ENST00000456661 876 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 RPS29P15-201ENST00000458329 171 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 FTH1P2-201ENST00000466086 412 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 RPS26P3-201ENST00000470205 348 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms