Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 NANOGP10-201ENST00000453325 895 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 RPL7L1P8-201ENST00000469911 741 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC084198.1-201ENST00000477747 402 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 RPL21P129-201ENST00000491732 478 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 NIPA2P2-201ENST00000496376 1083 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 FTH1P9-201ENST00000513251 355 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 SNORA70.14-201ENST00000516205 110 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 RNU2-58P-201ENST00000516403 183 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 ERHP1-201ENST00000523006 310 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC016957.1-201ENST00000534895 309 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC123904.3-201ENST00000547218 814 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AL021997.1-201ENST00000605757 193 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC004492.1-201ENST00000607036 742 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC068792.1-201ENST00000621354 417 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC091905.1-201ENST00000624400 311 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 USP8P1-201ENST00000494673 3183 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 U3.11-201ENST00000364476 212 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 Y_RNA.516-201ENST00000384541 124 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 SOD2P1-201ENST00000396543 562 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 MTATP6P4-201ENST00000427725 675 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AC018644.1-201ENST00000429934 551 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AC007389.2-201ENST00000434630 306 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 DNAJC19P4-201ENST00000440115 345 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 RPL9P33-201ENST00000484311 566 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AC108860.1-201ENST00000484521 383 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AC108078.1-201ENST00000508073 725 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AC022616.3-201ENST00000523940 148 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 AC119674.1-207ENST00000641355 633 ntBASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHMP4CQ96CF2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AL021368.2-201ENST00000606125 5352 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 Y_RNA.6-201ENST00000362350 114 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 U1.1-201ENST00000384101 164 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AL136372.1-201ENST00000403060 228 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 TXNP7-201ENST00000406296 293 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 HSPE1P8-201ENST00000406997 288 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC069157.1-201ENST00000421749 137 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 RPS3AP44-201ENST00000425466 790 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AL662791.1-201ENST00000441992 928 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 NOTCH2P1-201ENST00000443481 624 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 RPL9P6-201ENST00000492764 598 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 RNU6-390P-201ENST00000516259 103 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 RNU2-10P-201ENST00000516375 211 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 OR5D17P-201ENST00000531492 978 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC128657.1-201ENST00000549459 145 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC074050.1-201ENST00000563247 211 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 MIR3167-201ENST00000579623 85 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 BRDTP1-201ENST00000605735 677 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AL592295.2-201ENST00000612578 206 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AL355810.1-201ENST00000614629 552 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AL158209.2-201ENST00000619266 216 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 AC079684.1-201ENST00000621405 437 ntBASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms