Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.76□□□□□ -1.65
RTF1Q92541 RPL36AP51-201ENST00000487216 318 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.76□□□□□ -1.65
RTF1Q92541 MTCYBP18-201ENST00000501056 747 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.76□□□□□ -1.65
RTF1Q92541 AC005798.1-201ENST00000513715 387 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.76□□□□□ -1.65
RTF1Q92541 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.76□□□□□ -1.65
RTF1Q92541 AC022616.3-201ENST00000523940 148 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.76□□□□□ -1.65
RTF1Q92541 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.76□□□□□ -1.65
RTF1Q92541 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.76□□□□□ -1.65
RTF1Q92541 AL359212.1-201ENST00000556608 614 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
RTF1Q92541 AC067852.4-201ENST00000590314 478 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 NRBF2P5-201ENST00000603087 788 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AL162413.1-201ENST00000603198 110 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC007621.1-201ENST00000604544 437 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC093788.1-201ENST00000609356 927 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.76□□□□□ -1.65
RTF1Q92541 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC015967.1-201ENST00000619893 476 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.76□□□□□ -1.65
RTF1Q92541 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTF1Q92541 CASC19-280ENST00000642102 1351 ntBASIC4.76□□□□□ -1.65
RTF1Q92541 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.75□□□□□ -1.65
RTF1Q92541 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTF1Q92541 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTF1Q92541 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.75□□□□□ -1.65
RTF1Q92541 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.75□□□□□ -1.65
RTF1Q92541 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RTF1Q92541 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTF1Q92541 RNU6-1120P-201ENST00000362988 108 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 RNU6-1097P-201ENST00000363586 107 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 RNU6-456P-201ENST00000384493 107 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 RPS4XP8-201ENST00000402039 771 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.75□□□□□ -1.65
RTF1Q92541 AC012498.1-201ENST00000424037 437 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 CYCSP4-201ENST00000429682 331 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.75□□□□□ -1.65
RTF1Q92541 HMGB3P12-201ENST00000438745 556 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 AL356535.1-201ENST00000440335 398 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 AC093156.1-201ENST00000440382 670 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.75□□□□□ -1.65
RTF1Q92541 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.75□□□□□ -1.65
RTF1Q92541 AL645939.1-201ENST00000453429 797 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 RN7SL293P-201ENST00000481765 281 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.75□□□□□ -1.65
RTF1Q92541 AC098799.2-201ENST00000509466 868 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.75□□□□□ -1.65
RTF1Q92541 AC114781.4-201ENST00000513707 639 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.75□□□□□ -1.65
RTF1Q92541 AC135001.1-201ENST00000544546 283 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.75□□□□□ -1.65
RTF1Q92541 AC090616.5-202ENST00000582111 297 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 AC006116.10-201ENST00000591836 581 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 KC877982.1-201ENST00000602313 470 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTF1Q92541 AC063943.3-201ENST00000615562 356 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 uc_338.12-201ENST00000616344 181 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 AC002550.2-201ENST00000621246 394 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 AC091925.2-201ENST00000625059 256 ntBASIC4.75□□□□□ -1.65
RTF1Q92541 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTF1Q92541 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTF1Q92541 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTF1Q92541 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RTF1Q92541 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTF1Q92541 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTF1Q92541 ZNF33CP-201ENST00000432492 2030 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 MTCO1P12-201ENST00000414273 1543 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTF1Q92541 RNU6-797P-201ENST00000363101 109 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 SNORD46.1-201ENST00000364139 104 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 MIR3074-201ENST00000384885 81 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 RNU6-876P-201ENST00000391295 104 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 RNA5SP239-201ENST00000410218 129 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 ELOCP4-201ENST00000420090 333 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 SNRPEP10-201ENST00000420249 274 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 AL391219.1-201ENST00000422570 483 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.74□□□□□ -1.65
RTF1Q92541 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.74□□□□□ -1.65
RTF1Q92541 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.74□□□□□ -1.65
RTF1Q92541 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.74□□□□□ -1.65
RTF1Q92541 PRSS3P4-201ENST00000453323 162 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 snoU109.4-201ENST00000458953 143 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.74□□□□□ -1.65
RTF1Q92541 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.74□□□□□ -1.65
RTF1Q92541 RNU6-27P-201ENST00000516146 107 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 RNA5SP337-201ENST00000517007 109 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 AC090572.1-201ENST00000519251 160 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.74□□□□□ -1.65
RTF1Q92541 PTP4A1P6-201ENST00000531034 478 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.74□□□□□ -1.65
RTF1Q92541 AL360157.1-201ENST00000565962 87 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.74□□□□□ -1.65
RTF1Q92541 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.74□□□□□ -1.65
RTF1Q92541 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.74□□□□□ -1.65
RTF1Q92541 AC010680.3-201ENST00000604215 520 ntBASIC4.74□□□□□ -1.65
RTF1Q92541 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.74□□□□□ -1.65
RTF1Q92541 AC104985.2-201ENST00000620598 500 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms