Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 RPS20P22-201ENST00000473700 357 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC084024.2-201ENST00000503480 791 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC109471.1-201ENST00000511631 612 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 MTND2P31-201ENST00000512602 616 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC025881.1-201ENST00000518851 512 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC006518.2-201ENST00000542513 940 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 U73023.1-201ENST00000603134 700 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC005776.1-201ENST00000603164 290 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC002487.1-201ENST00000604565 994 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 HSPE1P7-201ENST00000604681 321 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC010738.1-201ENST00000604970 987 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC106900.2-201ENST00000604994 317 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC026741.1-201ENST00000605892 482 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC025754.2-201ENST00000606491 432 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC009318.4-201ENST00000620496 486 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 DBF4P1-201ENST00000412976 1892 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 NUP58P1-201ENST00000502546 1738 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 MIR6073-201ENST00000352083 89 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 RNA5SP88-201ENST00000365560 109 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 RNU6-482P-201ENST00000391068 107 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 RNA5SP181-201ENST00000410246 98 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 USP9YP19-201ENST00000412165 485 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 ATP5F1P1-201ENST00000433775 569 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC234064.1-201ENST00000436312 247 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC009237.8-201ENST00000445492 379 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 Y_RNA.638-201ENST00000459374 113 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 RPL23AP42-201ENST00000471152 471 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 RPL38P4-201ENST00000502376 214 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 COL6A4P2-205ENST00000509855 506 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 HMGB1P1-201ENST00000522557 636 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC015712.3-201ENST00000559380 164 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 ZNF971P-201ENST00000562068 1249 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC135628.1-201ENST00000568867 534 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 MIR4446-201ENST00000578505 67 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC098483.2-201ENST00000603158 454 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC012669.1-201ENST00000603209 283 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 RPAP2P1-201ENST00000603626 1168 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AL512506.1-201ENST00000613918 449 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC068880.4-201ENST00000623082 495 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC040168.1-201ENST00000623594 991 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 AC241585.2-209ENST00000638217 143 ntBASIC2.09□□□□□ -2.07
LMX1AQ8TE12 MTND5P29-201ENST00000458676 1807 ntBASIC2.09□□□□□ -2.08
LMX1AQ8TE12 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LMX1AQ8TE12 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LMX1AQ8TE12 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC008669.1-201ENST00000565823 2178 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 RNU6-839P-201ENST00000363347 108 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 U6.112-201ENST00000384129 70 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 MIR627-201ENST00000384979 97 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 TAF13P2-201ENST00000416876 286 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 RPL27AP8-201ENST00000424277 446 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC234781.2-201ENST00000426370 994 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC072039.1-201ENST00000477611 581 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 KLRA1P-201ENST00000503499 986 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC091860.1-201ENST00000505723 432 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC116337.1-201ENST00000509680 687 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 RAC1P5-201ENST00000512182 576 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 RNU6-1095P-201ENST00000516148 108 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 RNU6-885P-201ENST00000516607 104 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC093519.1-201ENST00000566109 298 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC140725.3-201ENST00000616193 880 ntBASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.08□□□□□ -2.08
LMX1AQ8TE12 AL512506.2-201ENST00000624472 458 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms